RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	H6PD	O95479	791 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	KLK3	P07288	261 aa	Predicted RBP	11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	SLC2A4	P14672	509 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	ITPKA	P23677	461 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	PTPN3	P26045	913 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	ERP29	P30040	261 aa	Known RBP	11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	CSNK1D	P48730	415 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	PPP2CB	P62714	309 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	PPP2CA	P67775	309 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	STX4	Q12846	297 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	KLF1	Q13351	362 aa	Predicted RBP	11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	KCNJ11	Q14654	390 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	PERM1	Q5SV97	790 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	ASCL5	Q7RTU5	278 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	LYSMD3	Q7Z3D4	306 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	LUZP2	Q86TE4	346 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	DSEL	Q8IZU8	1212 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	CENPL	Q8N0S6	344 aa	Predicted RBP	11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	OR6X1	Q8NH79	312 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	OR10J5	Q8NHC4	309 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	PIGK	Q92643	395 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	USP7	Q93009	1102 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	VOPP1	Q96AW1	172 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	C10orf90	Q96M02	699 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	OR1F2P	Q96R84	312 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	IL12RB2	Q99665	862 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	NPAS1	Q99742	590 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	HDAC8	Q9BY41	377 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	TXLNGY	Q9BZA5	131 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	GPR63	Q9BZJ6	419 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	ARRDC1-AS1	Q9H2J1	176 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	AKIP1	Q9NQ31	210 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	BABAM2	Q9NXR7	383 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	TAS2R10	Q9NYW0	307 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	PHTF1	Q9UMS5	762 aa		11.1	□□□□□ -0.63
BRCA1-222	ENST00000493919	GNG14	A0A1W2PPG7	69 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	PROB1	E7EW31	1015 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	AURKA	O14965	403 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	GPRIN2	O60269	458 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	SPAG6	O75602	509 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	RPP14	O95059	124 aa	Known RBP	11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	FGG	P02679	453 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	PRKCG	P05129	697 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	UMPS	P11172	480 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	HSD3B1	P14060	373 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	OGN	P20774	298 aa	Known RBP	11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ZP3	P21754	424 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ECHS1	P30084	290 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	TAGLN2	P37802	199 aa	Known RBP	11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	TMBIM6	P55061	237 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	TAS2R38	P59533	333 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	C17orf67	Q0P5P2	114 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	PIN1	Q13526	163 aa	Predicted RBP	11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	EFR3A	Q14156	821 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ATG14	Q6ZNE5	492 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	SZRD1	Q7Z422	152 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	AMIGO2	Q86SJ2	522 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	NOXA1	Q86UR1	476 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	SLC22A16	Q86VW1	577 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	METTL4	Q8N3J2	472 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	OR2L5	Q8NG80	312 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ELMO1	Q92556	727 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	EXT2	Q93063	718 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	BIRC7	Q96CA5	298 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	CRELD1	Q96HD1	420 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ZNF597	Q96LX8	424 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ZBTB18	Q99592	522 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	KCNS3	Q9BQ31	491 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	C2orf88	Q9BSF0	95 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	TEX12	Q9BXU0	123 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ADGRE3	Q9BY15	652 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	TRIM54	Q9BYV2	358 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	PITPNM3	Q9BZ71	974 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	MYRF	Q9Y2G1	1151 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	DMXL1	Q9Y485	3027 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	GON4L	Q3T8J9	2241 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	OTOGL	Q3ZCN5	2332 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	EP300	Q09472	2414 aa	Predicted RBP	11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	XKRY2	A2RUG3	117 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ANKDD1B	A6NHY2	528 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	UPK3BL1	B0FP48	263 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	UPK3BL2	E5RIL1	263 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	CDC7	O00311	574 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	CES2	O00748	559 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	GFRA3	O60609	400 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	SLC22A5	O76082	557 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	CBX6	O95503	412 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	IFNA2	P01563	188 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	MPL	P40238	635 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	CRAT	P43155	626 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ALDH9A1	P49189	494 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	SEMG2	Q02383	582 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ZNF45	Q02386	682 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	ILF2	Q12905	390 aa	Known RBP	11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	NFATC3	Q12968	1075 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	TEX44	Q53QW1	395 aa		11.09	□□□□□ -0.63
BRCA1-222	ENST00000493919	RALGPS1	Q5JS13	557 aa		11.09	□□□□□ -0.63

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