RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SLC29A3Q9BZD2 475 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 HDHD2Q9H0R4 259 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 RANBP3Q9H6Z4 567 aaPredicted RBP11.19□□□□□ -0.62
HDAC4-210ENST00000493582 FNIP2Q9P278 1114 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 EXO1Q9UQ84 846 aaKnown RBP11.19□□□□□ -0.62
HDAC4-210ENST00000493582 A0A1W2PRG6 482 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 C2orf78A6NCI8 922 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 CASKO14936 926 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 GADD45GO95257 159 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 SLC25A14O95258 325 aaPredicted RBP11.18□□□□□ -0.62
HDAC4-210ENST00000493582 HRGP04196 525 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 CD9P21926 228 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 EVX1P49640 407 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 ETV1P50549 477 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 ZNF280AP59817 542 aaPredicted RBP11.18□□□□□ -0.62
HDAC4-210ENST00000493582 RPL6Q02878 288 aaKnown RBP11.18□□□□□ -0.62
HDAC4-210ENST00000493582 NCF4Q15080 339 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 SHEQ5VZ18 495 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 TRILQ7L0X0 811 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 ZFP41Q8N8Y5 198 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 AP3S1Q92572 193 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 UCN3Q969E3 161 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 HHIPQ96QV1 700 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 SPON2Q9BUD6 331 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 TRIM62Q9BVG3 475 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 TSSK6Q9BXA6 273 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 NMNAT1Q9HAN9 279 aaPredicted RBP11.18□□□□□ -0.62
HDAC4-210ENST00000493582 SLCO1C1Q9NYB5 712 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 KCMF1Q9P0J7 381 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 UBQLN2Q9UHD9 624 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 ATP6V1HQ9UI12 483 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 DIMT1Q9UNQ2 313 aaKnown RBP11.18□□□□□ -0.62
HDAC4-210ENST00000493582 NINQ8N4C6 2090 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 LANCL1O43813 399 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 IFNA7P01567 189 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 ETFAP13804 333 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 BPIP17213 487 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 PRPS1L1P21108 318 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 KELP23276 732 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 ETV5P41161 510 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 RAB14P61106 215 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 PPP3R1P63098 170 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 ABRQ12979 859 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 GAB1Q13480 694 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 GPR176Q14439 515 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 COL28A1Q2UY09 1125 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 PUS10Q3MIT2 529 aaKnown RBP11.18□□□□□ -0.62
HDAC4-210ENST00000493582 COX20Q5RI15 118 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 UBE2Q1Q7Z7E8 422 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 CHCHD4Q8N4Q1 142 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 TCEANCQ8N8B7 351 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 POF1BQ8WVV4 589 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 SLC9A6Q92581 669 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 CREB3L1Q96BA8 519 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 SAMD11Q96NU1 681 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 TOXO94900 526 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 AMD1P17707 334 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 CCL23P55773 120 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 B2MP61769 119 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 EIF2B5Q13144 721 aaKnown RBP11.18□□□□□ -0.62
HDAC4-210ENST00000493582 GRM7Q14831 915 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 UAP1L1Q3KQV9 507 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 CLVS2Q5SYC1 327 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 TMEM107Q6UX40 140 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 B3GLCTQ6Y288 498 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 KIAA0907Q7Z7F0 614 aaPredicted RBP11.18□□□□□ -0.62
HDAC4-210ENST00000493582 C11orf65Q8NCR3 313 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 OR7D4Q8NG98 312 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 OR52H1Q8NGJ2 320 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 GATAD2BQ8WXI9 593 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 RBCK1Q9BYM8 510 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 CHST8Q9H2A9 424 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 FOLH1BQ9HBA9 442 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 RBPJLQ9UBG7 517 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 TNFRSF10DQ9UBN6 386 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 GJA3Q9Y6H8 435 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 PRSS21Q9Y6M0 314 aa11.18□□□□□ -0.62
HDAC4-210ENST00000493582 LOC105369274A0A096LPK9 316 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 A0A1B0GVC2 190 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 A6NIN4 97 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 ADM5C9JUS6 153 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 H3BN98 237 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 NDUFA2O43678 99 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 ZNF623O75123 536 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 PRAMEF12O95522 483 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 GBX2P52951 348 aaPredicted RBP11.17□□□□□ -0.62
HDAC4-210ENST00000493582 PTPN5P54829 565 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 TEAD4Q15561 434 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 ZXDCQ2QGD7 858 aaPredicted RBP11.17□□□□□ -0.62
HDAC4-210ENST00000493582 ZNF852Q6ZMS4 543 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 LAPTM4BQ86VI4 370 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 LINC00518Q8N0U6 118 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 OR4N4Q8N0Y3 316 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 TMEM163Q8TC26 289 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 FZD3Q9NPG1 666 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 CUEDC1Q9NWM3 386 aaPredicted RBP11.17□□□□□ -0.62
HDAC4-210ENST00000493582 ZMAT5Q9UDW3 170 aaKnown RBP11.17□□□□□ -0.62
HDAC4-210ENST00000493582 DOCK4Q8N1I0 1966 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 RFXAPO00287 272 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 PRRG1O14668 218 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms