RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 CLHC1Q8NHS4 586 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 TBC1D20Q96BZ9 403 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 PPCDCQ96CD2 204 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 ERP27Q96DN0 273 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 CMTM5Q96DZ9 223 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 CCDC106Q9BWC9 280 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 BHLHE41Q9C0J9 482 aaPredicted RBP12.51□□□□□ -0.41
SNX12-205ENST00000490561 NRSN2Q9GZP1 204 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 GIMAP4Q9NUV9 329 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 C14orf105Q9NVL8 296 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 TAS2R7Q9NYW3 318 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 ATG4BQ9Y4P1 393 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 B3GALT1Q9Y5Z6 326 aa12.51□□□□□ -0.41
SNX12-205ENST00000490561 A0A1W2PR48 441 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 BBIP1A8MTZ0 92 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 C9J4A7 227 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 MEN1O00255 615 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 CLDN4O14493 209 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 CFLARO15519 480 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 AKAP10O43572 662 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 STK17BO94768 372 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 TNFSF15O95150 251 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 AIFM1O95831 613 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 DLGAP3O95886 979 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 NTRK1P04629 796 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 FHP07954 510 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 FURINP09958 794 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 CCNYL3P0C7X3 344 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 PIK3R1P27986 724 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 KIR3DL1P43629 444 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 POLR2JP52435 117 aaKnown RBP12.5□□□□□ -0.41
SNX12-205ENST00000490561 NME5P56597 212 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 OLR1P78380 273 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 SHC2P98077 582 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 OCA2Q04671 838 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 RCAN2Q14206 197 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 KRT72Q14CN4 511 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 AGKQ53H12 422 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 CPTPQ5TA50 214 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 ANXA8L1Q5VT79 327 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 PRAMEF17Q5VTA0 474 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 C1orf189Q5VU69 101 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 ZNF385CQ66K41 422 aaPredicted RBP12.5□□□□□ -0.41
SNX12-205ENST00000490561 SLC48A1Q6P1K1 146 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 PAOXQ6QHF9 649 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 BLOC1S3Q6QNY0 202 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 C6orf15Q6UXA7 325 aaPredicted RBP12.5□□□□□ -0.41
SNX12-205ENST00000490561 ESX1Q8N693 406 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 METTL27Q8N6F8 245 aaPredicted RBP12.5□□□□□ -0.41
SNX12-205ENST00000490561 VPS37AQ8NEZ2 397 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 OR8J2Q8NGG1 315 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 OR5T3Q8NGG3 340 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 RP9Q8TA86 221 aaKnown RBP12.5□□□□□ -0.41
SNX12-205ENST00000490561 EGLN2Q96KS0 407 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 SLC25A23Q9BV35 468 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 TGIF2Q9GZN2 237 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 ACTL8Q9H568 366 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 RPF2Q9H7B2 306 aaKnown RBP12.5□□□□□ -0.41
SNX12-205ENST00000490561 TEX10Q9NXF1 929 aaPredicted RBP12.5□□□□□ -0.41
SNX12-205ENST00000490561 CCDC167Q9P0B6 97 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 HCN3Q9P1Z3 774 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 IFT80Q9P2H3 777 aaPredicted RBP12.5□□□□□ -0.41
SNX12-205ENST00000490561 TRPC4Q9UBN4 977 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 ZNF282Q9UDV7 671 aaPredicted RBP12.5□□□□□ -0.41
SNX12-205ENST00000490561 GPN3Q9UHW5 284 aaPredicted RBP12.5□□□□□ -0.41
SNX12-205ENST00000490561 NXT1Q9UKK6 140 aaKnown RBP12.5□□□□□ -0.41
SNX12-205ENST00000490561 MMACHCQ9Y4U1 282 aa12.5□□□□□ -0.41
SNX12-205ENST00000490561 IGLV3-12A0A075B6K2 115 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 A0A1W2PNU3 283 aaPredicted RBP12.49□□□□□ -0.41
SNX12-205ENST00000490561 CCT8L1PA6NM43 557 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 C9orf172C9J069 976 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 EBAG9O00559 213 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 CYR61O00622 381 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 DXOO77932 396 aaKnown RBP12.49□□□□□ -0.41
SNX12-205ENST00000490561 LRATO95237 230 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 SNRPB2P08579 225 aaKnown RBP12.49□□□□□ -0.41
SNX12-205ENST00000490561 S100A3P33764 101 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 XCR1P46094 333 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 OR1D4P47884 311 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 ALDH9A1P49189 494 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 MNAT1P51948 309 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 HSD17B7P56937 341 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 STX5Q13190 355 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 UGT8Q16880 541 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 COQ5Q5HYK3 327 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 OVCH1Q7RTY7 1134 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 TICAM1Q8IUC6 712 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 KRTCAP2Q8N6L1 136 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 FITM2Q8N6M3 262 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 SLC38A9Q8NBW4 561 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 MR1Q95460 341 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 GFM2Q969S9 779 aaKnown RBP12.49□□□□□ -0.41
SNX12-205ENST00000490561 COQ8BQ96D53 544 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 SPDL1Q96EA4 605 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 PEX11GQ96HA9 241 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 SLC46A1Q96NT5 459 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 DUSP26Q9BV47 211 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 YIPF2Q9BWQ6 316 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 SLC26A1Q9H2B4 701 aa12.49□□□□□ -0.41
SNX12-205ENST00000490561 RMND5AQ9H871 391 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms