RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 PLIN5Q00G26 463 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 SGCGQ13326 291 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 GTDC1Q4AE62 458 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 PYCR3Q53H96 274 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 CATSPEREQ5SY80 951 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 OTUD3Q5T2D3 398 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-207ENST00000489357 DEPDC1Q5TB30 811 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 KHDRBS2Q5VWX1 349 aaKnown RBP8.07□□□□□ -1.12
VTI1A-207ENST00000489357 KIAA1211LQ6NV74 962 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 ZC3H14Q6PJT7 736 aaKnown RBP8.07□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF773Q6PK81 442 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 CRTC3Q6UUV7 619 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 RBM44Q6ZP01 1051 aaKnown RBP8.07□□□□□ -1.12
VTI1A-207ENST00000489357 TMEM26Q6ZUK4 368 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 ARMCX6Q7L4S7 300 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 GPR141Q7Z602 305 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 SLC9B2Q86UD5 537 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 TRIM74Q86UV6 250 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 ANKRD46Q86W74 232 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 PTOV1Q86YD1 416 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 ERI1Q8IV48 349 aaKnown RBP8.07□□□□□ -1.12
VTI1A-207ENST00000489357 PHACTR4Q8IZ21 702 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 FAM86B1Q8N7N1 296 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 TP53I13Q8NBR0 393 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-207ENST00000489357 DENND6BQ8NEG7 585 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 FAM110BQ8TC76 370 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 C16orf78Q8WTQ4 265 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 FBLIM1Q8WUP2 373 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 SH3KBP1Q96B97 665 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 MENTQ9BUN1 341 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 SARGQ9BW04 601 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 GSX2Q9BZM3 304 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 ING2Q9H160 280 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 THSD1Q9NS62 852 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 FAM118AQ9NWS6 357 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 TAS2R7Q9NYW3 318 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 EHD3Q9NZN3 535 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 FAM8A1Q9UBU6 413 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-207ENST00000489357 PCDHGB3Q9Y5G1 929 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 DMDP11532 3685 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 WDR87Q6ZQQ6 2873 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF292O60281 2723 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 PCM1Q15154 2024 aa8.07□□□□□ -1.12
VTI1A-207ENST00000489357 TRBC2A0A5B9 178 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 ARRDC5A6NEK1 342 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 PRR23AA6NEV1 266 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 IGLON5A6NGN9 336 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 MID1O15344 667 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 SUV39H1O43463 412 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 TNFRSF21O75509 655 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 JRKO75564 520 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 PCDH8O95206 1070 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 APBB3O95704 486 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 DNTTP04053 509 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 GSNP06396 782 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 GNAO1P09471 354 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 DRD2P14416 443 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 GABRG2P18507 467 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 DDCP20711 480 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 UQCRC2P22695 453 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 FRKP42685 505 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-207ENST00000489357 PXNP49023 591 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-207ENST00000489357 RAB28P51157 221 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 KIAA1024LP59773 190 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 SELENOWP63302 87 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 TEKQ02763 1124 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 NKG7Q16617 165 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 HKDC1Q2TB90 917 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 CRB2Q5IJ48 1285 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 BROXQ5VW32 411 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 KDM4DQ6B0I6 523 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 SPESP1Q6UW49 350 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 WASH2PQ6VEQ5 465 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 FAM83HQ6ZRV2 1179 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-207ENST00000489357 FAM92BQ6ZTR7 304 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 NUDT13Q86X67 352 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 DCP2Q8IU60 420 aaKnown RBP8.06□□□□□ -1.12
VTI1A-207ENST00000489357 HDDC3Q8N4P3 179 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 SUMF1Q8NBK3 374 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 PLA2G15Q8NCC3 412 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 PIK3C3Q8NEB9 887 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 SRFBP1Q8NEF9 429 aaKnown RBP8.06□□□□□ -1.12
VTI1A-207ENST00000489357 OR4A15Q8NGL6 344 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 OR2L8Q8NGY9 312 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 PSMA8Q8TAA3 256 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 RASSF5Q8WWW0 418 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 OR5P2Q8WZ92 322 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 RGMAQ96B86 450 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 DTNBP1Q96EV8 351 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 ZC3H10Q96K80 434 aaKnown RBP8.06□□□□□ -1.12
VTI1A-207ENST00000489357 MRGPRX1Q96LB2 322 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 DOK1Q99704 481 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 APOL4Q9BPW4 351 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 BCL7BQ9BQE9 202 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 PSD2Q9BQI7 771 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 DOHHQ9BU89 302 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 MS4A8Q9BY19 250 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 MKRN2Q9H000 416 aaKnown RBP8.06□□□□□ -1.12
VTI1A-207ENST00000489357 TOR3AQ9H497 397 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms