RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 P3H2Q8IVL5 708 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 TRPV3Q8NET8 790 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 SLC5A11Q8WWX8 675 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 ZNF669Q96BR6 464 aaPredicted RBP14.92□□□□□ -0.02
USP48-210ENST00000489108 HIST1H2AHQ96KK5 128 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 TSNARE1Q96NA8 513 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 HIST1H2AJQ99878 128 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 YIPF4Q9BSR8 244 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 H2AFJQ9BTM1 129 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 SLC6A15Q9H2J7 730 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 TRMT6Q9UJA5 497 aaKnown RBP14.92□□□□□ -0.02
USP48-210ENST00000489108 NRDCO43847 1150 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 SERPINA6P08185 405 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 TPSB2P20231 275 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 SLC1A2P43004 574 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 TRPC1P48995 793 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 RGS4P49798 205 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 AGFG1P52594 562 aaKnown RBP14.91□□□□□ -0.02
USP48-210ENST00000489108 ZNF136P52737 540 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 RNF4P78317 190 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 CDK16Q00536 496 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 REEP5Q00765 189 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 SP140Q13342 867 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 TPSAB1Q15661 275 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 ELAVL1Q15717 326 aaKnown RBP14.91□□□□□ -0.02
USP48-210ENST00000489108 LRRC8EQ6NSJ5 796 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 UGT3A1Q6NUS8 523 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 PAQR3Q6TCH7 311 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 OPN5Q6U736 354 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 KIAA1328Q86T90 577 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 MORN4Q8NDC4 146 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 NEIL3Q8TAT5 605 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 PTPMT1Q8WUK0 201 aaPredicted RBP14.91□□□□□ -0.02
USP48-210ENST00000489108 Q96MF0 132 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 OR8D2Q9GZM6 311 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 ARL15Q9NXU5 204 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 ATRQ13535 2644 aa14.91□□□□□ -0.02
USP48-210ENST00000489108 ZCWPW2A0A1B0GU75 182 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 AHRRA9YTQ3 701 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 IL2RAP01589 272 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 SAT1P21673 171 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 TIMP3P35625 211 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 RAB38P57729 211 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 PPP2R2BQ00005 443 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 SIX1Q15475 284 aaPredicted RBP14.9□□□□□ -0.02
USP48-210ENST00000489108 CCNG2Q16589 344 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 ACSF3Q4G176 576 aaPredicted RBP14.9□□□□□ -0.02
USP48-210ENST00000489108 SLC22A10Q63ZE4 541 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 ADGRD1Q6QNK2 874 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 GSTA5Q7RTV2 222 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 MYO1HQ8N1T3 1032 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 FAM47BQ8NA70 645 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 RNF214Q8ND24 703 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 DAZLQ92904 295 aaKnown RBP14.9□□□□□ -0.02
USP48-210ENST00000489108 FAR2Q96K12 515 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 NDNQ99608 321 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 AIF1LQ9BQI0 150 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 NPLQ9BXD5 320 aaPredicted RBP14.9□□□□□ -0.02
USP48-210ENST00000489108 ZNF703Q9H7S9 590 aaPredicted RBP14.9□□□□□ -0.02
USP48-210ENST00000489108 ACKR4Q9NPB9 350 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 FBXO5Q9UKT4 447 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 ZANQ9Y493 2812 aa14.9□□□□□ -0.02
USP48-210ENST00000489108 GOSR1O95249 250 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 TNNI3P19429 210 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 KCNJ1P48048 391 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 BBS9Q3SYG4 887 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 NXPE4Q6UWF7 544 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 CAND1Q86VP6 1230 aaKnown RBP14.89□□□□□ -0.03
USP48-210ENST00000489108 LACC1Q8IV20 430 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 ZNF595Q8IYB9 648 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 LIX1Q8N485 282 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 SIMC1Q8NDZ2 872 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 OR8K3Q8NH51 312 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 ZNF592Q92610 1267 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 FBXL8Q96CD0 374 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 LINGO1Q96FE5 620 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 BDH2Q9BUT1 245 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 ALOXE3Q9BYJ1 711 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 PELI2Q9HAT8 420 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 PROK2Q9HC23 129 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 ZFP64Q9NPA5 681 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 C20orf96Q9NUD7 363 aaPredicted RBP14.89□□□□□ -0.03
USP48-210ENST00000489108 VTI1BQ9UEU0 232 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 STAB1Q9NY15 2570 aa14.89□□□□□ -0.03
USP48-210ENST00000489108 MAGEB16A2A368 324 aa14.88□□□□□ -0.03
USP48-210ENST00000489108 CYR61O00622 381 aa14.88□□□□□ -0.03
USP48-210ENST00000489108 SMPD2O60906 423 aa14.88□□□□□ -0.03
USP48-210ENST00000489108 CTNSO60931 367 aa14.88□□□□□ -0.03
USP48-210ENST00000489108 GUCA1CO95843 209 aa14.88□□□□□ -0.03
USP48-210ENST00000489108 HNRNPH1P31943 449 aaKnown RBP14.88□□□□□ -0.03
USP48-210ENST00000489108 STXBP1P61764 594 aaKnown RBP14.88□□□□□ -0.03
USP48-210ENST00000489108 KCNJ2P63252 427 aa14.88□□□□□ -0.03
USP48-210ENST00000489108 SARNPP82979 210 aaKnown RBP14.88□□□□□ -0.03
USP48-210ENST00000489108 SORDQ00796 357 aa14.88□□□□□ -0.03
USP48-210ENST00000489108 ASPHQ12797 758 aa14.88□□□□□ -0.03
USP48-210ENST00000489108 ZNF791Q3KP31 576 aaPredicted RBP14.88□□□□□ -0.03
USP48-210ENST00000489108 PIGGQ5H8A4 983 aa14.88□□□□□ -0.03
USP48-210ENST00000489108 PRAMEF20Q5VT98 475 aa14.88□□□□□ -0.03
USP48-210ENST00000489108 ARMC3Q5W041 872 aa14.88□□□□□ -0.03
USP48-210ENST00000489108 DRICH1Q6PGQ1 229 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms