RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 MAJINQ3KP22 176 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 SOWAHCQ53LP3 525 aaPredicted RBP8.31□□□□□ -1.08
PKP4-210ENST00000480171 ZNF385BQ569K4 471 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 AGAP6Q5VW22 663 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 ZNF544Q6NX49 715 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 ZNF852Q6ZMS4 543 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 GDPGP1Q6ZNW5 385 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 SLCO4C1Q6ZQN7 724 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.31□□□□□ -1.08
PKP4-210ENST00000480171 CMTM8Q8IZV2 173 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 AQP11Q8NBQ7 271 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 SETD6Q8TBK2 473 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 CAPSLQ8WWF8 208 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 RELTQ969Z4 430 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 MTERF3Q96E29 417 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 ZNF486Q96H40 463 aaPredicted RBP8.31□□□□□ -1.08
PKP4-210ENST00000480171 AGAP4Q96P64 663 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 KCNS3Q9BQ31 491 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 MIR1-1HGQ9H1L0 117 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 EXOSC4Q9NPD3 245 aaKnown RBP8.31□□□□□ -1.08
PKP4-210ENST00000480171 TAS2R9Q9NYW1 312 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 RAB23Q9ULC3 237 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 GRIP1Q9Y3R0 1128 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 SNX8Q9Y5X2 465 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 CFAP20Q9Y6A4 193 aaKnown RBP8.31□□□□□ -1.08
PKP4-210ENST00000480171 A0A1W2PRB8 838 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 DNTTP04053 509 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 FURINP09958 794 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 ARAFP10398 606 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 PTPN2P17706 415 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 XPAP23025 273 aaPredicted RBP8.31□□□□□ -1.08
PKP4-210ENST00000480171 PREPP48147 710 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 LIMK1P53667 647 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 OR2B6P58173 313 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 STARD3Q14849 445 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 TCTN1Q2MV58 587 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 SLX4IPQ5VYV7 408 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 FRMPD2BQ6IN97 320 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 ADNP2Q6IQ32 1131 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 POMZP3Q6PJE2 187 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 C19orf48Q6RUI8 117 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 PRR23CQ6ZRP0 262 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 COMMD6Q7Z4G1 85 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 HSD11B1LQ7Z5J1 315 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 RNF130Q86XS8 419 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 CHST14Q8NCH0 376 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 OR9Q1Q8NGQ5 310 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 OR5M11Q96RB7 305 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 RIOK2Q9BVS4 552 aaKnown RBP8.31□□□□□ -1.08
PKP4-210ENST00000480171 NEK6Q9HC98 313 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 MYNNQ9NPC7 610 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 GPATCH2Q9NW75 528 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 QPCTLQ9NXS2 382 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 SPG21Q9NZD8 308 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 ZNF69Q9UC07 566 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 ZNF221Q9UK13 617 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 TRAPPC4Q9Y296 219 aa8.31□□□□□ -1.08
PKP4-210ENST00000480171 CAB39Q9Y376 341 aaPredicted RBP8.31□□□□□ -1.08
PKP4-210ENST00000480171 C5orf58C9J3I9 102 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 J3KTA2 159 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 M0R129 80 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 PITPNM1O00562 1244 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 ARHGAP33O14559 1287 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 CSTF2P33240 577 aaKnown RBP eCLIP8.3□□□□□ -1.085e-8■■■□□ 17.4
PKP4-210ENST00000480171 CNR2P34972 360 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 LIMS1P48059 325 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 DSTNP60981 165 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 RHAGQ02094 409 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 EEF1A2Q05639 463 aaKnown RBP8.3□□□□□ -1.08
PKP4-210ENST00000480171 RUNX1T1Q06455 604 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 TSTA3Q13630 321 aaPredicted RBP8.3□□□□□ -1.08
PKP4-210ENST00000480171 GANABQ14697 944 aaKnown RBP8.3□□□□□ -1.08
PKP4-210ENST00000480171 CCSMST1Q4G0I0 132 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 MEDAGQ5VYS4 303 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 Q6ZVL8 140 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 Q6ZVU0 165 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 C16orf78Q8WTQ4 265 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 BTN2A2Q8WVV5 523 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 KLHL6Q8WZ60 621 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 NEIL2Q969S2 332 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 VOPP1Q96AW1 172 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 ZNF558Q96NG5 402 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 NLNQ9BYT8 704 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 NMNAT1Q9HAN9 279 aaPredicted RBP8.3□□□□□ -1.08
PKP4-210ENST00000480171 SIAEQ9HAT2 523 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 SMURF1Q9HCE7 757 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 FTSJ1Q9UET6 329 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 EXO1Q9UQ84 846 aaKnown RBP8.3□□□□□ -1.08
PKP4-210ENST00000480171 PRAMEF33A0A0G2JMD5 474 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 SLC5A10A0PJK1 596 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 TMEM202A6NGA9 273 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 LEFTY2O00292 366 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 RGS5O15539 181 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 PRAMEF10O60809 474 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 ADAP00813 363 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 GNRH1P01148 92 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 C1GALT1C1LP0DN25 315 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 CHMP24386 653 aa8.3□□□□□ -1.08
PKP4-210ENST00000480171 HLA-FP30511 346 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms