RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 EEF1A1P68104 462 aaKnown RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 RNF4P78317 190 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 OCRLQ01968 901 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 TBL3Q12788 808 aaKnown RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 BMPR2Q13873 1038 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 MPEG1Q2M385 716 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 KLHL38Q2WGJ6 581 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 BBS9Q3SYG4 887 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 PIGGQ5H8A4 983 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 AARS2Q5JTZ9 985 aaKnown RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 DCST1Q5T197 706 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 PRAMEF20Q5VT98 475 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 EEF1A1P5Q5VTE0 462 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 LIPNQ5VXI9 398 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 MILR1Q7Z6M3 343 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 REXO1L1PQ8IX06 675 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 RCOR2Q8IZ40 523 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 CA13Q8N1Q1 262 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 ARIH2OSQ8N7S6 290 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF321PQ8N8H1 164 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 SGMS2Q8NHU3 365 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 ACTL9Q8TC94 416 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 UTP15Q8TED0 518 aaKnown RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 PTPMT1Q8WUK0 201 aaPredicted RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 ASB11Q8WXH4 323 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 ANKRD9Q96BM1 317 aaPredicted RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 INTS12Q96CB8 462 aaKnown RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 SMIM10Q96HG1 83 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 ART5Q96L15 291 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 NAP1L5Q96NT1 182 aaPredicted RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 TM9SF2Q99805 663 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 HEMGNQ9BXL5 484 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 UGT2B28Q9BY64 529 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 SHARPINQ9H0F6 387 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 RHBGQ9H310 441 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 UBQLN3Q9H347 655 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 PACSIN3Q9UKS6 424 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 LAMP3Q9UQV4 416 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF281Q9Y2X9 895 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC6A5Q9Y345 797 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 CHCHD2Q9Y6H1 151 aaPredicted RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 IKBKGQ9Y6K9 419 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 TENM1Q9UKZ4 2725 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 FRG2CA6NGY1 282 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 PSMD12O00232 456 aaPredicted RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 HS3ST1O14792 307 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 MSTNO14793 375 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 NIPSNAP2O75323 286 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 TRIM3O75382 744 aaPredicted RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 TRAPPC6AO75865 159 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 ACSL3O95573 720 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 SYF2O95926 243 aaKnown RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 PLAUP00749 431 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 IGHV4-39P01824 125 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 RBP3P10745 1247 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 SRD5A1P18405 259 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 ADRA1DP25100 572 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 GDF1P27539 372 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 CPOXP36551 454 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 CD79BP40259 229 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 CDK9P50750 372 aaKnown RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 MTTPP55157 894 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 HSD17B7P56937 341 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 RAB8AP61006 207 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 RPS4XP62701 263 aaKnown RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 PRAMEP78395 509 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 GAB1Q13480 694 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 ELAVL1Q15717 326 aaKnown RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 TMEM249Q2WGJ8 235 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF474Q6S9Z5 364 aaPredicted RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 C12orf54Q6X4T0 127 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 CYHR1Q6ZMK1 362 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF704Q6ZNC4 412 aaPredicted RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF550Q7Z398 422 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 STRA8Q7Z7C7 330 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 CAND1Q86VP6 1230 aaKnown RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 CDKL3Q8IVW4 592 aaPredicted RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 KATNAL2Q8IYT4 538 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 TMEM132CQ8N3T6 1108 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 MORN4Q8NDC4 146 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 TMEM52Q8NDY8 209 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 ABHD11Q8NFV4 315 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 OR4K1Q8NGD4 311 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 OR52K1Q8NGK4 314 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 OR5L2Q8NGL0 311 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 NT5CQ8TCD5 201 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 PEX13Q92968 403 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 WNT2BQ93097 391 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 ABTB1Q969K4 478 aaPredicted RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 FAM136AQ96C01 138 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 STARD4Q96DR4 205 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 TRMT61AQ96FX7 289 aaKnown RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 JSRP1Q96MG2 331 aaPredicted RBP6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 QRFPRQ96P65 431 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 CITED4Q96RK1 184 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 TUBA1CQ9BQE3 449 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 TMEM204Q9BSN7 226 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 PCBD2Q9H0N5 130 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 L2HGDHQ9H9P8 463 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 ADAP2Q9NPF8 381 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms