RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 FOSL1P15407 271 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 CERS1P27544 350 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 CXCR5P32302 372 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 PIGAP37287 484 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 PEX19P40855 299 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 ASCL1P50553 236 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 HK2P52789 917 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 CDKN2DP55273 166 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 AP1S2P56377 157 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 HSD17B7P56937 341 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 RAB38P57729 211 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 RUNX2Q13950 521 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 SLBPQ14493 270 aaKnown RBP eCLIP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 PCBP2Q15366 365 aaKnown RBP eCLIP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 TOMM20Q15388 145 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 ELAVL1Q15717 326 aaKnown RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 HSPB2Q16082 182 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 DEFB113Q30KQ7 82 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 PRAMEF20Q5VT98 475 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 TMEM198Q66K66 360 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 TRIM40Q6P9F5 258 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 DRICH1Q6PGQ1 229 aaPredicted RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 OPN5Q6U736 354 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 NXPE4Q6UWF7 544 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 KIAA0408Q6ZU52 694 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 CAMKMTQ7Z624 323 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 CTAGE6Q86UF2 777 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF595Q8IYB9 648 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 ARMC10Q8N2F6 343 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF321PQ8N8H1 164 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 TMEM52Q8NDY8 209 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 FAM13CQ8NE31 585 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 OR4K1Q8NGD4 311 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 OR56A3Q8NH54 315 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 DAZLQ92904 295 aaKnown RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 GAL3ST3Q96A11 431 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 FBXL8Q96CD0 374 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 C18orf12Q96KH6 178 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 SERPINB12Q96P63 405 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 CSF3RQ99062 836 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 REPIN1Q9BWE0 567 aaKnown RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 SLC6A15Q9H2J7 730 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 PELI2Q9HAT8 420 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 CLK4Q9HAZ1 481 aaKnown RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 NEUROD4Q9HD90 331 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 SEMA4BQ9NPR2 832 aaPredicted RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 LZTFL1Q9NQ48 299 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 TRMT1Q9NXH9 659 aaKnown RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 SLC17A6Q9P2U8 582 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 SPRR3Q9UBC9 169 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 MTRF1LQ9UGC7 380 aaKnown RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 CBLCQ9ULV8 474 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 SLC22A14Q9Y267 594 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 ZKSCAN5Q9Y2L8 839 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 KCNE2Q9Y6J6 123 aa6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF469Q96JG9 3925 aaPredicted RBP6.18□□□□□ -1.42
RTFDC1-206ENST00000477485 ANKDD1BA6NHY2 528 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 NCF1BA6NI72 391 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 NCF1CA8MVU1 366 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 SMAD7O15105 426 aaKnown RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 SUSD5O60279 629 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 LDB3O75112 727 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 SH3BGRLO75368 114 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 TRAPPC6AO75865 159 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 GLSO94925 669 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 IL2RAP01589 272 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 IGHG3P01860 377 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 SERPINA6P08185 405 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 MLNP12872 115 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 COX7A2P14406 83 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 NCF1P14598 390 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 PGAM1P18669 254 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 GDF1P27539 372 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 PCSK6P29122 969 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 HNRNPH1P31943 449 aaKnown RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 AGFG1P52594 562 aaKnown RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 RNF4P78317 190 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 ID2Q02363 134 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 ASPHQ12797 758 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 RCN2Q14257 317 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 CRYMQ14894 314 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 RIPPLY2Q5TAB7 128 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 CHSY3Q70JA7 882 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 STRA8Q7Z7C7 330 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 SCUBE1Q8IWY4 988 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 KLHDC8AQ8IYD2 350 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 FBXW8Q8N3Y1 598 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 GOLM1Q8NBJ4 401 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 RELL2Q8NC24 303 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 C2CD4AQ8NCU7 369 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 MORN4Q8NDC4 146 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 TNIP2Q8NFZ5 429 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 OR5L2Q8NGL0 311 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 OR14A16Q8NHC5 309 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 SLC22A8Q8TCC7 542 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 SLC2A12Q8TD20 617 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 FAM222BQ8WU58 562 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 RNASE6Q93091 150 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms