RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 DCAF7P61962 342 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 NKX6-1P78426 367 aaPredicted RBP8.99□□□□□ -0.97
COL4A5-204ENST00000477429 CCZ1BP86790 482 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 CCZ1P86791 482 aaPredicted RBP8.99□□□□□ -0.97
COL4A5-204ENST00000477429 ID2Q02363 134 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 KEAP1Q14145 624 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 TERF2Q15554 542 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 TPSAB1Q15661 275 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 FBXL19-AS1Q494R0 122 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 NDUFAF5Q5TEU4 345 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 PRAMEF9Q5VWM5 478 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 DMRTA1Q5VZB9 504 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 PAOXQ6QHF9 649 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 DGAT2L6Q6ZPD8 337 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 RTL4Q6ZR62 310 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 RGS9BPQ6ZS82 235 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 FAM47EQ6ZV65 393 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 ABHD13Q7L211 337 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 STRA8Q7Z7C7 330 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.99□□□□□ -0.97
COL4A5-204ENST00000477429 SLC5A11Q8WWX8 675 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 RNASE6Q93091 150 aaKnown RBP8.99□□□□□ -0.97
COL4A5-204ENST00000477429 LINGO1Q96FE5 620 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 COX4I2Q96KJ9 171 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 PANX2Q96RD6 677 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 EPB41L4BQ9H329 900 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 ZNF703Q9H7S9 590 aaPredicted RBP8.99□□□□□ -0.97
COL4A5-204ENST00000477429 ZNF395Q9H8N7 513 aaPredicted RBP8.99□□□□□ -0.97
COL4A5-204ENST00000477429 PLAC1Q9HBJ0 212 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 PRTFDC1Q9NRG1 225 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 MMACHCQ9Y4U1 282 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 MED12Q93074 2177 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 ARHGAP21Q5T5U3 1957 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 HIVEP2P31629 2446 aa8.99□□□□□ -0.97
COL4A5-204ENST00000477429 TRIM64A6NGJ6 449 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 TRIM64BA6NI03 449 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 CLCA1A8K7I4 914 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 PSMD12O00232 456 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-204ENST00000477429 SIAH2O43255 324 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 GUCA1CO95843 209 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 F12P00748 615 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-204ENST00000477429 EPXP11678 715 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 GRK3P35626 688 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 AHRP35869 848 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 MAGEA6P43360 314 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 ASCL1P50553 236 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 RNF4P78317 190 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 RGS1Q08116 209 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 SLC13A2Q13183 592 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 SLC10A1Q14973 349 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 RBBP5Q15291 538 aaKnown RBP8.98□□□□□ -0.97
COL4A5-204ENST00000477429 PCBP2Q15366 365 aaKnown RBP eCLIP8.98□□□□□ -0.97
COL4A5-204ENST00000477429 CCNG2Q16589 344 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 ZNF791Q3KP31 576 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-204ENST00000477429 ACSF3Q4G176 576 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-204ENST00000477429 HSP90AA5PQ58FG0 334 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 DCST1Q5T197 706 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 WLSQ5T9L3 541 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 PRAMEF20Q5VT98 475 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 DUPD1Q68J44 220 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 TTC27Q6P3X3 843 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 CASC4Q6P4E1 433 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 NXPE4Q6UWF7 544 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 GK5Q6ZS86 529 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 GPALPP1Q8IXQ4 340 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 FBXL8Q96CD0 374 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 MS4A6EQ96DS6 147 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 HAUS8Q9BT25 410 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 FRMD8P1Q9BZ68 369 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-204ENST00000477429 FAM129AQ9BZQ8 928 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 LDAHQ9H6V9 325 aa8.98□□□□□ -0.97
COL4A5-204ENST00000477429 IARS2Q9NSE4 1012 aaKnown RBP8.98□□□□□ -0.97
COL4A5-204ENST00000477429 C20orf96Q9NUD7 363 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-204ENST00000477429 HCN1O60741 890 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 LDB3O75112 727 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 BANF1O75531 89 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 C8GP07360 202 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 CERS1P27544 350 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 GDF5P43026 501 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 PLA2G16P53816 162 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 LIM2P55344 173 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 RAB38P57729 211 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 ASPHQ12797 758 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 FOXF2Q12947 444 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 THOC5Q13769 683 aaKnown RBP8.97□□□□□ -0.97
COL4A5-204ENST00000477429 BMPR2Q13873 1038 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 CSHL1Q14406 222 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 PPP1R3AQ16821 1122 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 Q5PR19 223 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 SEL1L2Q5TEA6 688 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 BICRALQ6AI39 1079 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 DRICH1Q6PGQ1 229 aaPredicted RBP8.97□□□□□ -0.97
COL4A5-204ENST00000477429 SBSNQ6UWP8 590 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 HSDL2Q6YN16 418 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 UBE3DQ7Z6J8 389 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 TMPRSS11BQ86T26 416 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 KIAA1328Q86T90 577 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 THOC6Q86W42 341 aaKnown RBP8.97□□□□□ -0.97
COL4A5-204ENST00000477429 C9orf40Q8IXQ3 194 aa8.97□□□□□ -0.97
COL4A5-204ENST00000477429 KLHDC8AQ8IYD2 350 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms