RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 LINC01560Q8TB33 94 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 SLC5A11Q8WWX8 675 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 CAPZA3Q96KX2 299 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 PRTFDC1Q9NRG1 225 aa10.49□□□□□ -0.73
BRCA1-213ENST00000476777 ZNF629Q9UEG4 869 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-213ENST00000476777 TRMT6Q9UJA5 497 aaKnown RBP10.49□□□□□ -0.73
BRCA1-213ENST00000476777 CLDN4O14493 209 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 HAUS5O94927 633 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 GOSR1O95249 250 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 EPPINO95925 133 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 HRGP04196 525 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 P04436 131 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 HIST1H2AGP0C0S8 130 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-213ENST00000476777 RFPL3SP0C7P2 107 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 HIST1H2ADP20671 130 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 PIGAP37287 484 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 RGS4P49798 205 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 ZNF136P52737 540 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 WNT3P56703 355 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 CCZ1BP86790 482 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 CCZ1P86791 482 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-213ENST00000476777 SLC13A2Q13183 592 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 ELAVL1Q15717 326 aaKnown RBP10.48□□□□□ -0.73
BRCA1-213ENST00000476777 CCNG2Q16589 344 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 ACSF3Q4G176 576 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-213ENST00000476777 TOR1AIP1Q5JTV8 583 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 Q5PR19 223 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 UGT3A1Q6NUS8 523 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 DRICH1Q6PGQ1 229 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-213ENST00000476777 ADGRD1Q6QNK2 874 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 MAATS1Q7Z4T9 603 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 CLNKQ7Z7G1 428 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 CAND1Q86VP6 1230 aaKnown RBP10.48□□□□□ -0.73
BRCA1-213ENST00000476777 KIF18BQ86Y91 864 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 TMEM132CQ8N3T6 1108 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 ZNF321PQ8N8H1 164 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 OR8K3Q8NH51 312 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 PTPMT1Q8WUK0 201 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-213ENST00000476777 ZNF669Q96BR6 464 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-213ENST00000476777 HIST1H2AHQ96KK5 128 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 TSNARE1Q96NA8 513 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 HIST1H2AJQ99878 128 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 H2AFJQ9BTM1 129 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 ZNF703Q9H7S9 590 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-213ENST00000476777 SH2D2AQ9NP31 389 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 ACKR4Q9NPB9 350 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 ARL15Q9NXU5 204 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 FBXO5Q9UKT4 447 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 CLCA3PQ9Y6N3 262 aa10.48□□□□□ -0.73
BRCA1-213ENST00000476777 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.48□□□□□ -0.73
BRCA1-213ENST00000476777 AHRRA9YTQ3 701 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 H7C1Q1 480 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 ARHGEF9O43307 516 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 NRDCO43847 1150 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 TIMP3P35625 211 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 AP1S2P56377 157 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 RAB38P57729 211 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 RNF4P78317 190 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 SORDQ00796 357 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 PAQR3Q6TCH7 311 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 OPN5Q6U736 354 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 KIAA1328Q86T90 577 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 ZNF595Q8IYB9 648 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 MYO1HQ8N1T3 1032 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 LRRC25Q8N386 305 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-213ENST00000476777 FAM47BQ8NA70 645 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 RNF214Q8ND24 703 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 MORN4Q8NDC4 146 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 OR14A16Q8NHC5 309 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 NEIL3Q8TAT5 605 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 DAZLQ92904 295 aaKnown RBP10.47□□□□□ -0.73
BRCA1-213ENST00000476777 GAL3ST3Q96A11 431 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 KIAA1191Q96A73 305 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 FBXL8Q96CD0 374 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 LINGO1Q96FE5 620 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 NDNQ99608 321 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 AIF1LQ9BQI0 150 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 YIPF4Q9BSR8 244 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 NPLQ9BXD5 320 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-213ENST00000476777 OR8D2Q9GZM6 311 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 SLC6A15Q9H2J7 730 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 PELI2Q9HAT8 420 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 VTI1BQ9UEU0 232 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 ADAM21Q9UKJ8 722 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 CAPN6Q9Y6Q1 641 aa10.47□□□□□ -0.73
BRCA1-213ENST00000476777 A0A0G2JN53 185 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 MYOCOSA0A1B0GUC4 107 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 MAGEB16A2A368 324 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 LRRC3CA6NJW4 275 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 SDR42E2A6NKP2 422 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 INAFM1C9JVW0 142 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 CYR61O00622 381 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 IL2RAP01589 272 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 IFNA16P05015 189 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 MAGEA6P43360 314 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 KCNJ1P48048 391 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 TERF1P54274 439 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 STXBP1P61764 594 aaKnown RBP10.46□□□□□ -0.73
BRCA1-213ENST00000476777 SARNPP82979 210 aaKnown RBP10.46□□□□□ -0.73
BRCA1-213ENST00000476777 RBBP5Q15291 538 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms