RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 FLRT2O43155 660 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 KIF1CO43896 1103 aaKnown RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 TMPRSS11DO60235 418 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CPNE6O95741 557 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 PIM1P11309 404 aaPredicted RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CKMT1AP12532 417 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CD59P13987 128 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CSRP1P21291 193 aaKnown RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CPN2P22792 545 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CERS1P27544 350 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 NTSP30990 170 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 NOVA1P51513 510 aaKnown RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 PLIN5Q00G26 463 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 GRM7Q14831 915 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 FAM214AQ32MH5 1076 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 DEFB134Q4QY38 66 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 PIGGQ5H8A4 983 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 SNAP47Q5SQN1 464 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 LRIF1Q5T3J3 769 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 NDUFAF5Q5TEU4 345 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 NANOGP8Q6NSW7 305 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 TMEM214Q6NUQ4 689 aaKnown RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 C8orf82Q6P1X6 216 aaPredicted RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 GUSBP11Q6P575 273 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CYB5D1Q6P9G0 228 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 ZNF621Q6ZSS3 439 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 HPS6Q86YV9 775 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 GPR135Q8IZ08 494 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 OR4A15Q8NGL6 344 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 OR2I1PQ8NGU4 316 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 ADAMTS18Q8TE60 1221 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CCDC124Q96CT7 223 aaKnown RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 ZBED6CLQ96FA7 236 aaPredicted RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CLPTM1LQ96KA5 538 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 LRGUKQ96M69 825 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CCDC115Q96NT0 180 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 THUMPD3Q9BV44 507 aaKnown RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 NPLQ9BXD5 320 aaPredicted RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 TMEM121BQ9BXQ6 578 aaPredicted RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 MUC13Q9H3R2 512 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 RAD21L1Q9H4I0 556 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 NANOGQ9H9S0 305 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CLK4Q9HAZ1 481 aaKnown RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 LYRM4Q9HD34 91 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 LHX9Q9NQ69 397 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 PRDM9Q9NQV7 894 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 SUCOQ9UBS9 1254 aaKnown RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 ZNF282Q9UDV7 671 aaPredicted RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 SLC7A8Q9UHI5 535 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 FBXW2Q9UKT8 454 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 CLCA2Q9UQC9 943 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 ENTPD4Q9Y227 616 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 DSPP15924 2871 aaKnown RBP11.59□□□□□ -0.55
MRPL55-227ENST00000475832 IGHV5-51A0A0C4DH38 117 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 P2RX6O15547 441 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 LDOC1O95751 146 aaPredicted RBP11.59□□□□□ -0.55
MRPL55-227ENST00000475832 RPLP0P05388 317 aaKnown RBP11.59□□□□□ -0.55
MRPL55-227ENST00000475832 ZCCHC18P0CG32 403 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 SMIM10L1P0DMW3 83 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 NR2F6P10588 404 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 SLC6A2P23975 617 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 AVPR1BP47901 424 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 EMP3P54852 163 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 MC1RQ01726 317 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 TRAP1Q12931 704 aaKnown RBP11.59□□□□□ -0.55
MRPL55-227ENST00000475832 SPIDRQ14159 915 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 MUM1Q2TAK8 710 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 DEFB110Q30KQ9 67 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 PROX2Q3B8N5 592 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 ANKRD26P1Q6NSI1 321 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 DLEU7Q6UYE1 221 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 DNAJC14Q6Y2X3 702 aaPredicted RBP11.59□□□□□ -0.55
MRPL55-227ENST00000475832 ZNF793Q6ZN11 406 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 ANKRD46Q86W74 232 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 SLC15A3Q8IY34 581 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 FAM47BQ8NA70 645 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 IFI44Q8TCB0 444 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 OR5P2Q8WZ92 322 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 GATA6Q92908 595 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 TMEM125Q96AQ2 219 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 ASB9Q96DX5 294 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 SMIM10Q96HG1 83 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 ANKRD27Q96NW4 1050 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 BBS4Q96RK4 519 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 KCTD14Q9BQ13 255 aaPredicted RBP11.59□□□□□ -0.55
MRPL55-227ENST00000475832 SLC39A3Q9BRY0 314 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 PAIP1Q9H074 479 aaKnown RBP11.59□□□□□ -0.55
MRPL55-227ENST00000475832 LRRN3Q9H3W5 708 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 NEUROD4Q9HD90 331 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 FAM60AQ9NP50 221 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 ABCD2Q9UBJ2 740 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 SERTAD3Q9UJW9 196 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 UTS2RQ9UKP6 389 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 PCDHA9Q9Y5H5 950 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 ZNF780BQ9Y6R6 833 aa11.59□□□□□ -0.55
MRPL55-227ENST00000475832 HELZ2Q9BYK8 2649 aaKnown RBP11.59□□□□□ -0.55
MRPL55-227ENST00000475832 CABIN1Q9Y6J0 2220 aa11.58□□□□□ -0.56
MRPL55-227ENST00000475832 BLACEA4D250 179 aa11.58□□□□□ -0.56
MRPL55-227ENST00000475832 FXYD1O00168 92 aa11.58□□□□□ -0.56
MRPL55-227ENST00000475832 GSTA4O15217 222 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms