RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 EPC2Q52LR7 807 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 TEX35Q5T0J7 233 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 FAM182AQ5T1J6 154 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 RNLSQ5VYX0 342 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 SPOPLQ6IQ16 392 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CYP20A1Q6UW02 462 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CCBE1Q6UXH8 406 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF534Q76KX8 674 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF720Q7Z2F6 126 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ADGRD2Q7Z7M1 963 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CBWD2Q8IUF1 395 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CREBRFQ8IUR6 639 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 FAM114A1Q8IWE2 563 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 C12orf56Q8IXR9 622 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 C4orf19Q8IY42 314 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 EFCAB13Q8IY85 973 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ANKRD13CQ8N6S4 541 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC185Q8N715 623 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 TMEM161BQ8NDZ6 487 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ANKRD20A12PQ8NF67 263 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF397Q8NF99 534 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 NEK11Q8NG66 645 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 OR1J1Q8NGS3 322 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 OR4C3Q8NH37 302 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 KIF18AQ8NI77 898 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ERMNQ8TAM6 284 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 UCMAQ8WVF2 138 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 RFFLQ8WZ73 363 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC47Q96A33 483 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 JAKMIP2Q96AA8 810 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 INTS12Q96CB8 462 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 OPTNQ96CV9 577 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ERO1AQ96HE7 468 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 MPP4Q96JB8 637 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CAPZA3Q96KX2 299 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF285Q96NJ3 590 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 MYADMQ96S97 322 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 RIT2Q99578 217 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 GFI1Q99684 422 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 NAPGQ99747 312 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 TSG101Q99816 390 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 TRPM6Q9BX84 2022 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 SPATC1LQ9H0A9 340 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 TMEM117Q9H0C3 514 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 POLR3FQ9H1D9 316 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ST6GALNAC4Q9H4F1 302 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 DENND2DQ9H6A0 471 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 HAUS4Q9H6D7 363 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 NHEJ1Q9H9Q4 299 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PDFQ9HBH1 243 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ACKR4Q9NPB9 350 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ACP6Q9NPH0 428 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 LZTFL1Q9NQ48 299 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 DMAC2Q9NW81 257 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 IRAK4Q9NWZ3 460 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 MTMR10Q9NXD2 777 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 TAS2R14Q9NYV8 317 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 AASSQ9UDR5 926 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ARMCX3Q9UH62 379 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CHORDC1Q9UHD1 332 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 NOCTQ9UK39 431 aaKnown RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ODF2LQ9ULJ1 636 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PACSIN2Q9UNF0 486 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 AGTPBP1Q9UPW5 1226 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 NME7Q9Y5B8 376 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 PIAS3Q9Y6X2 628 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ZDBF2Q9HCK1 2354 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 SDK1Q7Z5N4 2213 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CABIN1Q9Y6J0 2220 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 MPDZO75970 2070 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 TICRRQ7Z2Z1 1910 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 MUC22E2RYF6 1773 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-203ENST00000473854 ATP8B3O60423 1300 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 SPTBP11277 2137 aa1.36□□□□□ -2.19
CCDC39-203ENST00000473854 CFAP47Q6ZTR5 3102 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CACNA1EQ15878 2313 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CNTRLQ7Z7A1 2325 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ASXL3Q9C0F0 2248 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 LRP4O75096 1905 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 VPS13CQ709C8 3753 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 NBPF19A0A087WUL8 3843 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CCL15-CCL14A0A0B4J2E2 113 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 A0A1W2PQF6 199 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 GLTPD2A6NH11 291 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 BTNL10A8MVZ5 291 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 TCP11X1B4DZS4 312 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 C19orf81C9J6K1 198 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 H3BQF6 201 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 O00370 1275 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 CXCL11O14625 94 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF195O14628 629 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SMAD9O15198 467 aaKnown RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 B4GALT5O43286 388 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 KIF5CO60282 957 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 DAB1O75553 588 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 PRKRAO75569 313 aaKnown RBP1.35□□□□□ -2.19
CCDC39-203ENST00000473854 PALMO75781 387 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 STAM2O75886 525 aa1.35□□□□□ -2.19
CCDC39-203ENST00000473854 SEC14L2O76054 403 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms