RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 LRRC63Q05C16 580 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 ELAVL2Q12926 359 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 EPS8Q12929 822 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 TFDP1Q14186 410 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 KNOP1Q1ED39 458 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 TAF1BQ53T94 588 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 CENPPQ6IPU0 288 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 C11orf57Q6ZUT1 292 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 SH2D6Q7Z4S9 175 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 PRPF39Q86UA1 669 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 VSIG1Q86XK7 387 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 METTL13Q8N6R0 699 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 KIAA0895Q8NCT3 520 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 PRSS33Q8NF86 280 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 GOLGA5Q8TBA6 731 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 ZFAND2BQ8WV99 257 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 PRPF31Q8WWY3 499 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 NELFBQ8WX92 580 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 GTF3AQ92664 365 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 P2RX5Q93086 422 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 ACCSQ96QU6 501 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 PIGQQ9BRB3 760 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 URM1Q9BTM9 101 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 POLR3FQ9H1D9 316 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 WNT5BQ9H1J7 359 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 TMEM206Q9H813 350 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 POLD4Q9HCU8 107 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 GKN1Q9NS71 199 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 TBC1D7Q9P0N9 293 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 CGNQ9P2M7 1197 aaKnown RBP4.65□□□□□ -1.67
CCDC39-202ENST00000471307 DAPK2Q9UIK4 370 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 MOB4Q9Y3A3 225 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 CSAG2Q9Y5P2 127 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 SCN10AQ9Y5Y9 1956 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 UBE4BO95155 1302 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 ARID2Q68CP9 1835 aa4.65□□□□□ -1.67
CCDC39-202ENST00000471307 LOC102723996A0A087X1L8 192 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 MEX3AA1L020 520 aaKnown RBP4.64□□□□□ -1.67
CCDC39-202ENST00000471307 TMEM221A6NGB7 291 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 KBTBD13C9JR72 458 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 H7C0S8 307 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 K7ERI5 159 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 SLC16A4O15374 487 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 CSH1P0DML2 217 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 CSH2P0DML3 217 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 CCL5P13501 91 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 GLRA2P23416 452 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 OAS2P29728 719 aaKnown RBP4.64□□□□□ -1.67
CCDC39-202ENST00000471307 NMT1P30419 496 aaKnown RBP4.64□□□□□ -1.67
CCDC39-202ENST00000471307 NNMTP40261 264 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 MNDAP41218 407 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 CCR10P46092 362 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 NRIP1P48552 1158 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 LMAN1P49257 510 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 ACLYP53396 1101 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 FKBP3Q00688 224 aaKnown RBP4.64□□□□□ -1.67
CCDC39-202ENST00000471307 LAMTOR4Q0VGL1 99 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 RIGQ13278 110 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 RASA2Q15283 850 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 TPD52L1Q16890 204 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-202ENST00000471307 MARCH8Q5T0T0 291 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 HECTD3Q5T447 861 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 LYSMD4Q5XG99 296 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 KLHL10Q6JEL2 608 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 CXCL17Q6UXB2 119 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 PTAR1Q7Z6K3 402 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-202ENST00000471307 RPAINQ86UA6 219 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 LUZP1Q86V48 1076 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 ZNF410Q86VK4 478 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 SYCP3Q8IZU3 236 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 TMEM161BQ8NDZ6 487 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 OR13C3Q8NGS6 347 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 SCFD1Q8WVM8 642 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 GLT1D1Q96MS3 346 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 DEFB118Q96PH6 123 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 TSG101Q99816 390 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 ADPGKQ9BRR6 497 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 DGCR6LQ9BY27 220 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 MRPL1Q9BYD6 325 aaKnown RBP4.64□□□□□ -1.67
CCDC39-202ENST00000471307 NFKBIZQ9BYH8 718 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 OR2B2Q9GZK3 357 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 C2orf40Q9H1Z8 148 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 GRPEL1Q9HAV7 217 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 RPS10P5Q9NQ39 176 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 DPP3Q9NY33 737 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 EXOC7Q9UPT5 735 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 TRAF3IP3Q9Y228 551 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 AGRNO00468 2067 aa4.64□□□□□ -1.67
CCDC39-202ENST00000471307 HTTP42858 3142 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 LRRIQ4A6NIV6 560 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 C2orf81A6NN90 581 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 CETN3O15182 167 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 ADAMDEC1O15204 470 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 CALUO43852 315 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-202ENST00000471307 GNA14O95837 355 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 PIGRP01833 764 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 ZNF18P17022 549 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 SAT1P21673 171 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 CDH3P22223 829 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 GCH1P30793 250 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms