RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 MAN2A2P49641 1150 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 PLA2G16P53816 162 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 IST1P53990 364 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 MTTPP55157 894 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 PPP2R2AP63151 447 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 FRG1Q14331 258 aaKnown RBP12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 EFTUD2Q15029 972 aaKnown RBP eCLIP12.86□□□□□ -0.353e-6■■■■■ 41.9
SEMA3F-208ENST00000470737 ZNF750Q32MQ0 723 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 XKR6Q5GH73 641 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 WLSQ5T9L3 541 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 OPN5Q6U736 354 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 ADAMTSL2Q86TH1 951 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 PDIK1LQ8N165 341 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 GOLM1Q8NBJ4 401 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 OR2L5Q8NG80 312 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 OR5L2Q8NGL0 311 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 SREK1Q8WXA9 508 aaKnown RBP12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 NINJ1Q92982 152 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 SARAFQ96BY9 339 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 SGCZQ96LD1 299 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 KRT12Q99456 494 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 ERP44Q9BS26 406 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 TTYH2Q9BSA4 534 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 CAPS2Q9BXY5 557 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 OR8D2Q9GZM6 311 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 PITHD1Q9GZP4 211 aaPredicted RBP12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 REXO4Q9GZR2 422 aaKnown RBP12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 AICDAQ9GZX7 198 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 CTNNAL1Q9UBT7 734 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 COPS7AQ9UBW8 275 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 EDARQ9UNE0 448 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 OARD1Q9Y530 152 aa12.86□□□□□ -0.35
SEMA3F-208ENST00000470737 NAV3Q8IVL0 2385 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 A0A0G2JMM0 328 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 ATP6AP2A0A1C7CYW4 349 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 A0A1W2PPB8 328 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 A0A1W2PRS3 328 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 FAM221AA4D161 298 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 EFCAB8A8MWE9 144 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 KIR3DP1A8MWS1 328 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 AQP7O14520 342 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 CLGNO14967 610 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 CTNSO60931 367 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 ATP6AP2O75787 350 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 GLSO94925 669 aaPredicted RBP12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 IGHG3P01860 377 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 GLI4P10075 376 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 CERS1P27544 350 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 HNRNPFP52597 415 aaKnown RBP12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 HK2P52789 917 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 LIM2P55344 173 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 CKAP4Q07065 602 aaKnown RBP12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 SERTAD2Q14140 314 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 SLC10A1Q14973 349 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 WHAMMP3Q1A5X7 153 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 SLC25A35Q3KQZ1 300 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 MSS51Q4VC12 460 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 C1orf185Q5T7R7 199 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 SLCO4C1Q6ZQN7 724 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 TRILQ7L0X0 811 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 WDR53Q7Z5U6 358 aaPredicted RBP12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 TMEM251Q8N6I4 163 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 TMEM52Q8NDY8 209 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 NRGNQ92686 78 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 KIAA1191Q96A73 305 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 TRIM44Q96DX7 344 aaPredicted RBP12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 POM121Q96HA1 1249 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 VPS39Q96JC1 886 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 SCYL1Q96KG9 808 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 C16orf45Q96MC5 204 aaPredicted RBP12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 FOXC2Q99958 501 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 POLDIP3Q9BY77 421 aaKnown RBP12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 ALOXE3Q9BYJ1 711 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 PHACTR1Q9C0D0 580 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 NT5DC2Q9H857 520 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 ALKBH4Q9NXW9 302 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 GPRC5BQ9NZH0 403 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 WHRNQ9P202 907 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 IKZF3Q9UKT9 509 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 DAPP1Q9UN19 280 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 CHMP2BQ9UQN3 213 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 LIPGQ9Y5X9 500 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 SPACA6W5XKT8 324 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 NF1P21359 2839 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 ABCA4P78363 2273 aa12.85□□□□□ -0.35
SEMA3F-208ENST00000470737 AKAP6Q13023 2319 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 ARHGAP21Q5T5U3 1957 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 A0A0G2JNJ9 132 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 MYOCOSA0A1B0GUC4 107 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 A0A1B0GVC2 190 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 FAM95CA0A1B0GW59 222 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 TMEM200CA6NKL6 621 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 C17orf105B2RV13 164 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 E7ESA3 106 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 SUSD5O60279 629 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 GABRA1P14867 456 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 PEX19P40855 299 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 ELK3P41970 407 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 GDF5P43026 501 aa12.84□□□□□ -0.35
SEMA3F-208ENST00000470737 NR0B1P51843 470 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms