RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 DEPDC1Q5TB30 811 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 H3F3CQ6NXT2 135 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 UBE3DQ7Z6J8 389 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 MILR1Q7Z6M3 343 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 OR52B6Q8NGF0 335 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 HUS1BQ8NHY5 278 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 M1APQ8TC57 530 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 ACMSDQ8TDX5 336 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 MZB1Q8WU39 189 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 KCNC2Q96PR1 638 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 TBCDQ9BTW9 1192 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 ZBTB26Q9HCK0 441 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 PLA2G3Q9NZ20 509 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 SUCOQ9UBS9 1254 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 DCDC2Q9UHG0 476 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 PCTPQ9UKL6 214 aa13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 KLF2Q9Y5W3 355 aaPredicted RBP13.18□□□□□ -0.3
CCHCR1-211ENST00000467553 UGDHO60701 494 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 MAOAP21397 527 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 PTX3P26022 381 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 SERPINB1P30740 379 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 PIK3CBP42338 1070 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 NEK2P51955 445 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 RAP1GDS1P52306 607 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 CDH13P55290 713 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 LIM2P55344 173 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 RAB38P57729 211 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 RPS13P62277 151 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 PHEXP78562 749 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 ERCC6LQ2NKX8 1250 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 TMEM35AQ53FP2 167 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 KHDRBS2Q5VWX1 349 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 TTC19Q6DKK2 380 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 OR4C11Q6IEV9 310 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 PAPD4Q6PIY7 484 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 GFRALQ6UXV0 394 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 QSOX2Q6ZRP7 698 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 LCA5Q86VQ0 697 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 L3MBTL4Q8NA19 623 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 FAM47BQ8NA70 645 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 ARMC2Q8NEN0 867 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 OR2W6PQ8NHA6 318 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 EPS8L3Q8TE67 593 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 RGMAQ96B86 450 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 REPS1Q96D71 796 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 TAAR6Q96RI8 345 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 LPAR4Q99677 370 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 NTMT1Q9BV86 223 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 SORBS1Q9BX66 1292 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 ROGDIQ9GZN7 287 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 KCNK13Q9HB14 408 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 NECTIN3Q9NQS3 549 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 PRDM9Q9NQV7 894 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 PRTFDC1Q9NRG1 225 aa13.17□□□□□ -0.3
CCHCR1-211ENST00000467553 H0YIV9 168 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 PPP6CO00743 305 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 CLDN4O14493 209 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 DLX3O60479 287 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 SUPT7LO94864 414 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 GSTA1P08263 222 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 ATP5A1P25705 553 aaKnown RBP13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 SSR2P43308 183 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 CASP6P55212 293 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 MEP1AQ16819 746 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 RPTNQ6XPR3 784 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 ZNF793Q6ZN11 406 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 FJX1Q86VR8 437 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 TDRPQ86YL5 185 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 CNPY4Q8N129 248 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 LGI4Q8N135 537 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 HORMAD2Q8N7B1 307 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 ACOT4Q8N9L9 421 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 TMEM52Q8NDY8 209 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 OR4F6Q8NGB9 312 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 TRPC4APQ8TEL6 797 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 MAPKAP1Q9BPZ7 522 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 CENPKQ9BS16 269 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 PPCSQ9HAB8 311 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 MMP25Q9NPA2 562 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 DMRT3Q9NQL9 472 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 PNO1Q9NRX1 252 aaKnown RBP13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 SEC14L3Q9UDX4 400 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 FBXW2Q9UKT8 454 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 DAPP1Q9UN19 280 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 MRPS33Q9Y291 106 aaKnown RBP13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 MYO7BQ6PIF6 2116 aa13.16□□□□□ -0.3
CCHCR1-211ENST00000467553 ABCA12Q86UK0 2595 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 MYOCOSA0A1B0GUC4 107 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 ZG16O60844 167 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 CDH16O75309 829 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 F10P00742 488 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 RPS17P08708 135 aaKnown RBP13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 HIST1H1TP22492 207 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 ATP5F1P24539 256 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 CCT5P48643 541 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 HNRNPFP52597 415 aaKnown RBP13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 CLCQ05315 142 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 ZNF33BQ06732 778 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 IFFO1Q0D2I5 559 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 SLC13A2Q13183 592 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms