RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 TAS2R16Q9NYV7 291 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 TNFRSF10DQ9UBN6 386 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 ORC5O43913 435 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 HPRP00739 348 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 C1GALT1C1LP0DN25 315 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 ATF6P18850 670 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 CD9P21926 228 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 CBLP22681 906 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 CMPK1P30085 196 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 MPIP34949 423 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 CTSCP53634 463 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 VLDLRP98155 873 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 NNATQ16517 81 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 LEXMQ3ZCV2 418 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 KLHL22Q53GT1 634 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 SLC8B1Q6J4K2 584 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 ZNF655Q8N720 491 aaPredicted RBP8.71□□□□□ -1.02
HPS4-208ENST00000464362 SRFBP1Q8NEF9 429 aaKnown RBP8.71□□□□□ -1.02
HPS4-208ENST00000464362 GPR150Q8NGU9 434 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 OR51A7Q8NH64 312 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 GATAD2BQ8WXI9 593 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 SLCO4A1Q96BD0 722 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 RBM18Q96H35 190 aaKnown RBP8.71□□□□□ -1.02
HPS4-208ENST00000464362 MAPKAP1Q9BPZ7 522 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 PDCD10Q9BUL8 212 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 SRMSQ9H3Y6 488 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 ELL3Q9HB65 397 aaPredicted RBP8.71□□□□□ -1.02
HPS4-208ENST00000464362 NEK6Q9HC98 313 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 TBCCD1Q9NVR7 557 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 ZNF224Q9NZL3 707 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 MAN2B2Q9Y2E5 1009 aa8.71□□□□□ -1.02
HPS4-208ENST00000464362 A0A1B0GW55 424 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 CHST10O43529 356 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 IFNGP01579 166 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 DUX4L2P0CJ85 424 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 DUX4L3P0CJ86 424 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 DUX4L4P0CJ87 422 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 DUX4L5P0CJ88 424 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 DUX4L6P0CJ89 424 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 DUX4L7P0CJ90 424 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 CSF2RAP15509 400 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 SYN1P17600 705 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 C4BPBP20851 252 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 CD72P21854 359 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 IGFBP4P22692 258 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 SOX3P41225 446 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 GUCA1AP43080 201 aaPredicted RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 MAGEA12P43365 314 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 KCNC4Q03721 635 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 MORN1Q5T089 497 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 BICRALQ6AI39 1079 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 FAM92BQ6ZTR7 304 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 C6orf120Q7Z4R8 191 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 TSPYL5Q86VY4 417 aaPredicted RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 LINC01465Q8N7H1 131 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 SMPDL3AQ92484 453 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 NKD1Q969G9 470 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 MYEOVQ96EZ4 313 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 AHCYL2Q96HN2 611 aaKnown RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 MAELQ96JY0 434 aaKnown RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 GAL3ST4Q96RP7 486 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 DUX4Q9UBX2 424 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 CD300AQ9UGN4 299 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 PCDHGA10Q9Y5H3 936 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 CACNA1IQ9P0X4 2223 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 A0A1B0GVC2 190 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 A6NIN4 97 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 M0R3H8 397 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 ITIH1P19827 911 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 PDHA2P29803 388 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 AP2S1P53680 142 aaPredicted RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 CRISP1P54107 249 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 GRM2Q14416 872 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 FBXO43Q4G163 708 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 PLEKHS1Q5SXH7 462 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 DUS1LQ6P1R4 473 aaKnown RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 ENPP7Q6UWV6 458 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 LRRTM4Q86VH4 590 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 OR8H3Q8N146 312 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 LILRA3Q8N6C8 439 aaPredicted RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 GOLM1Q8NBJ4 401 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 CRELD1Q96HD1 420 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 TMEM246Q9BRR3 403 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 IL1RAPQ9NPH3 570 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 BRD7Q9NPI1 651 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 PAQR5Q9NXK6 330 aaPredicted RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 BRWD3Q6RI45 1802 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 A0A1W2PQ72 361 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 UBE2QL1A1L167 161 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 ANHXE9PGG2 379 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 J3KTA2 159 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 CTDSP2O14595 271 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 CAPN5O15484 640 aaPredicted RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 TOXO94900 526 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 SLITRK5O94991 958 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 ADH5P11766 374 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 CYBAP13498 195 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 AHCYP23526 432 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 FSHRP23945 695 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 VIPR2P41587 438 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms