RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 ACTN3Q08043 901 aaPredicted RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 TBL3Q12788 808 aaKnown RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 ASPHQ12797 758 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 CRB2Q5IJ48 1285 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 PAPD4Q6PIY7 484 aaKnown RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 FRMD7Q6ZUT3 714 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 ZNF605Q86T29 641 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 GPR180Q86V85 440 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 GBP7Q8N8V2 638 aaPredicted RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 TMEM52Q8NDY8 209 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 NFAM1Q8NET5 270 aaPredicted RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 METTL6Q8TCB7 284 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 ELP5Q8TE02 316 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 AGAP11Q8TF27 550 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 CHTF18Q8WVB6 975 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 SELENOMQ8WWX9 145 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 TM9SF4Q92544 642 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 MTFMTQ96DP5 389 aaKnown RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 PGM2Q96G03 612 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 CNDP1Q96KN2 507 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 SMC6Q96SB8 1091 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 TRMOQ9BU70 441 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 GATA5Q9BWX5 397 aaPredicted RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 RBCK1Q9BYM8 510 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 LYARQ9NX58 379 aaKnown RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 SIRT5Q9NXA8 310 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 PHF11Q9UIL8 331 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 ACTL7BQ9Y614 415 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 KALRNO60229 2985 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 CPAMD8Q8IZJ3 1885 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 HELZ2Q9BYK8 2649 aaKnown RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 IGHV3-20A0A0C4DH32 117 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 SAP18O00422 153 aaKnown RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 UBFD1O14562 309 aaKnown RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 RGS16O15492 202 aaPredicted RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 ULK1O75385 1050 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 SEC24DO94855 1032 aaPredicted RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 CREB1P16220 341 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 MAOAP21397 527 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 ETV4P43268 484 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 GPR143P51810 404 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 HNRNPH2P55795 449 aaKnown RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 SLC26A5P58743 744 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 GALNT1Q10472 559 aaPredicted RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 CSTF3Q12996 717 aaKnown RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 MFAP5Q13361 173 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 SERTAD2Q14140 314 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 PCLAFQ15004 111 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 CFAP157Q5JU67 520 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 Q6ZS92 163 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 PAGE2Q7Z2X7 111 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 EXOC3L1Q86VI1 746 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 NUDT13Q86X67 352 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 PTRH1Q86Y79 214 aaKnown RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 C10orf107Q8IVU9 208 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 ARMC10Q8N2F6 343 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 ZADH2Q8N4Q0 377 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 CCNYL1Q8N7R7 359 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 CDYL2Q8N8U2 506 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 CCDC63Q8NA47 563 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 OR6Y1Q8NGX8 325 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 TCP10LQ8TDR4 215 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 HAS2Q92819 552 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 TANKQ92844 425 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 ANKRD9Q96BM1 317 aaPredicted RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 ZIM3Q96PE6 472 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 CSF3RQ99062 836 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 SORBS1Q9BX66 1292 aaKnown RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 IQCGQ9H095 443 aaKnown RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 RNF32Q9H0A6 362 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 MID1IP1Q9NPA3 183 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 FARSBQ9NSD9 589 aaKnown RBP11.32□□□□□ -0.6
HPS1-206ENST00000462743 VPS29Q9UBQ0 182 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 FBXW2Q9UKT8 454 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 ATG4BQ9Y4P1 393 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 POLEQ07864 2286 aa11.32□□□□□ -0.6
HPS1-206ENST00000462743 SVILO95425 2214 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 SAGE2PA6NJ88 616 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 TGFBR3LH3BV60 316 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 CTIFO43310 598 aaKnown RBP11.31□□□□□ -0.6
HPS1-206ENST00000462743 TMPRSS11DO60235 418 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 NPHS1O60500 1241 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 SPAG7O75391 227 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 EEDO75530 441 aaKnown RBP11.31□□□□□ -0.6
HPS1-206ENST00000462743 FGF4P08620 206 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 FAM58BPP0C7Q3 252 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 ITGAMP11215 1152 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 CPN2P22792 545 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 TPP2P29144 1249 aaPredicted RBP11.31□□□□□ -0.6
HPS1-206ENST00000462743 PPP2R1BP30154 601 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 HMOX2P30519 316 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 ALDH3A1P30838 453 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 TLX1P31314 330 aaPredicted RBP11.31□□□□□ -0.6
HPS1-206ENST00000462743 TRA2BP62995 288 aaKnown RBP11.31□□□□□ -0.6
HPS1-206ENST00000462743 SLC13A2Q13183 592 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 ESPL1Q14674 2120 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 ELAVL1Q15717 326 aaKnown RBP11.31□□□□□ -0.6
HPS1-206ENST00000462743 BTBD16Q32M84 506 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 SGO1Q5FBB7 561 aa11.31□□□□□ -0.6
HPS1-206ENST00000462743 CEP85LQ5SZL2 805 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms