RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 SLC13A2Q13183 592 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 ABRAXAS2Q15018 415 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 PCOLCEQ15113 449 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 SFT2D3Q587I9 215 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 SGO1Q5FBB7 561 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 PRSS58Q8IYP2 241 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 ARFGAP2Q8N6H7 521 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 CHTF18Q8WVB6 975 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 EXTL1Q92935 676 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 RNF32Q9H0A6 362 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 ILKAPQ9H0C8 392 aaPredicted RBP10.06□□□□□ -0.8
UBR4-208ENST00000459947 SLC25A18Q9H1K4 315 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 RAP2CQ9Y3L5 183 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 FER1L5A0AVI2 2057 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 TIA1P31483 386 aaKnown RBP eCLIP10.06□□□□□ -0.8
UBR4-208ENST00000459947 MAGOHP61326 146 aaKnown RBP10.06□□□□□ -0.8
UBR4-208ENST00000459947 EEF1A2Q05639 463 aaKnown RBP10.06□□□□□ -0.8
UBR4-208ENST00000459947 STX3Q13277 289 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 LINC00303Q3SY05 128 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 PAPD4Q6PIY7 484 aaKnown RBP10.06□□□□□ -0.8
UBR4-208ENST00000459947 SLC5A8Q8N695 610 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 ZNF764Q96H86 408 aaPredicted RBP10.06□□□□□ -0.8
UBR4-208ENST00000459947 SMAD5Q99717 465 aaKnown RBP10.06□□□□□ -0.8
UBR4-208ENST00000459947 AICDAQ9GZX7 198 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 EHD3Q9NZN3 535 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 KCMF1Q9P0J7 381 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 ANAPC2Q9UJX6 822 aa10.06□□□□□ -0.8
UBR4-208ENST00000459947 PPIEQ9UNP9 301 aaKnown RBP10.06□□□□□ -0.8
UBR4-208ENST00000459947 TMEM120BA0PK00 339 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 CYR61O00622 381 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 TBX6O95947 436 aaPredicted RBP10.05□□□□□ -0.8
UBR4-208ENST00000459947 IFI6P09912 130 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 ASMTP46597 345 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 HEPACAMQ14CZ8 416 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 SYT16Q17RD7 645 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 AGAP7PQ5VUJ5 663 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 GPALPP1Q8IXQ4 340 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 OR5T3Q8NGG3 340 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 VMP1Q96GC9 406 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 AGAP4Q96P64 663 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 SH3GL2Q99962 352 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 RPF2Q9H7B2 306 aaKnown RBP10.05□□□□□ -0.8
UBR4-208ENST00000459947 TRAF6Q9Y4K3 522 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 HEMK1Q9Y5R4 338 aaPredicted RBP10.05□□□□□ -0.8
UBR4-208ENST00000459947 ABCE1P61221 599 aaKnown RBP10.05□□□□□ -0.8
UBR4-208ENST00000459947 CHAF1BQ13112 559 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 HSP90B2PQ58FF3 399 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 COMMD6Q7Z4G1 85 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 SLC39A7Q92504 469 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 IMMP1LQ96LU5 166 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 DGAT2Q96PD7 388 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 C1orf109Q9NX04 203 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 FBXW2Q9UKT8 454 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 SPTBP11277 2137 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 PIK3R1P27986 724 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 CCL11P51671 97 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 OLR1P78380 273 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 CHI3L2Q15782 390 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 IGFL3Q6UXB1 125 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 ISLR2Q6UXK2 745 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 ZNF793Q6ZN11 406 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 ZADH2Q8N4Q0 377 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 OR6Y1Q8NGX8 325 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 OR8K3Q8NH51 312 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 ERP27Q96DN0 273 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 MAPKAP1Q9BPZ7 522 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 MLXIPLQ9NP71 852 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 VTI1BQ9UEU0 232 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 HAO1Q9UJM8 370 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 CFL2Q9Y281 166 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 ASB4Q9Y574 426 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 PCDHA9Q9Y5H5 950 aa10.05□□□□□ -0.8
UBR4-208ENST00000459947 DMXL1Q9Y485 3027 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 PROM1O43490 865 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 PCDH7O60245 1069 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 GPR75O95800 540 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 ALOX15P16050 662 aaPredicted RBP10.04□□□□□ -0.8
UBR4-208ENST00000459947 CASRP41180 1078 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 NEK2P51955 445 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 SLC26A5P58743 744 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 KLRB1Q12918 225 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 MFAP5Q13361 173 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 RNF31Q96EP0 1072 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 COPS7AQ9UBW8 275 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 ZNF225Q9UK10 706 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 KLF11O14901 512 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 FURINP09958 794 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 STT3AP46977 705 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 CLCN2P51788 898 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 ARL13AQ5H913 290 aaPredicted RBP10.04□□□□□ -0.8
UBR4-208ENST00000459947 C1orf52Q8N6N3 182 aaKnown RBP10.04□□□□□ -0.8
UBR4-208ENST00000459947 OR5L2Q8NGL0 311 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 LRTM1Q9HBL6 345 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 ZNF160Q9HCG1 818 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 MYNNQ9NPC7 610 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 THAP1Q9NVV9 213 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 SEC16AO15027 2179 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 A0A0G2JN53 185 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 OR6C76A6NM76 312 aa10.04□□□□□ -0.8
UBR4-208ENST00000459947 C4orf51C9J302 202 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms