RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 H3BQF6 201 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 MANBAO00462 879 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 CYR61O00622 381 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 CLDN4O14493 209 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 UBFD1O14562 309 aaKnown RBP18.73■□□□□ 0.59
COL9A3-202ENST00000452372 KRT6AP02538 564 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 KRT6BP04259 564 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 ENO1P06733 434 aaKnown RBP18.73■□□□□ 0.59
COL9A3-202ENST00000452372 ITGA3P26006 1051 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 KRT6CP48668 564 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 HSD17B7P56937 341 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 Q0VFX4 171 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 ASPHQ12797 758 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 ZNF595Q8IYB9 648 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 MAPKAP1Q9BPZ7 522 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 TUBB6Q9BUF5 446 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 NUDT9Q9BW91 350 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 DDX31Q9H8H2 851 aaKnown RBP18.73■□□□□ 0.59
COL9A3-202ENST00000452372 MID1IP1Q9NPA3 183 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 ACTL7BQ9Y614 415 aa18.73■□□□□ 0.59
COL9A3-202ENST00000452372 SPTBN1Q01082 2364 aaKnown RBP18.73■□□□□ 0.59
COL9A3-202ENST00000452372 IGKV3D-11A0A0A0MRZ8 115 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 ULK1O75385 1050 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 ICAM2P13598 275 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 MAOAP21397 527 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 HMOX2P30519 316 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 ALDH3A1P30838 453 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 PGDP52209 483 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 HNRNPFP52597 415 aaKnown RBP18.72■□□□□ 0.59
COL9A3-202ENST00000452372 ZNF33BQ06732 778 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 SLAMF1Q13291 335 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 KBTBD2Q8IY47 623 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 TMEM52Q8NDY8 209 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 ZBTB9Q96C00 473 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 SMAD5Q99717 465 aaKnown RBP18.72■□□□□ 0.59
COL9A3-202ENST00000452372 WDR77Q9BQA1 342 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-202ENST00000452372 GATA5Q9BWX5 397 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-202ENST00000452372 LHPPQ9H008 270 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 ZNF552Q9H707 407 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-202ENST00000452372 NECTIN3Q9NQS3 549 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 PRTFDC1Q9NRG1 225 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 AHSPQ9NZD4 102 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 SPACA6W5XKT8 324 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 CNTRLQ7Z7A1 2325 aa18.72■□□□□ 0.59
COL9A3-202ENST00000452372 NBPF19A0A087WUL8 3843 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 IGHV3-20A0A0C4DH32 117 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 TCRBV16S1A1N1A0A5B0 115 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 SERPINA7P05543 415 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 HSD3B1P14060 373 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 HSD3B2P26439 372 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 ETV4P43268 484 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 OR4D2P58180 307 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 RAPSNQ13702 412 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 SFT2D3Q587I9 215 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 TCHHL1Q5QJ38 904 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-202ENST00000452372 FAM219BQ5XKK7 198 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 NUDT13Q86X67 352 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 SCUBE1Q8IWY4 988 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 FAM47BQ8NA70 645 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 THOC3Q96J01 351 aaKnown RBP18.71■□□□□ 0.59
COL9A3-202ENST00000452372 CNDP1Q96KN2 507 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 CSF3RQ99062 836 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 TRMOQ9BU70 441 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 NMRK1Q9NWW6 199 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 MS4A12Q9NXJ0 267 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 C5AR2Q9P296 337 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 FBXW2Q9UKT8 454 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 SLC12A4Q9UP95 1085 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 ZNF451Q9Y4E5 1061 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 TIMM22Q9Y584 194 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 ICE1Q9Y2F5 2266 aa18.71■□□□□ 0.59
COL9A3-202ENST00000452372 ESPL1Q14674 2120 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 A0A0A6YYD5 115 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 BLACEA4D250 179 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 CTNSO60931 367 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 EEDO75530 441 aaKnown RBP18.7■□□□□ 0.58
COL9A3-202ENST00000452372 SEC24DO94855 1032 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-202ENST00000452372 MYZAPP0CAP1 466 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 PRR35P0CG20 571 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 ACTN3Q08043 901 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-202ENST00000452372 CASP8Q14790 479 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 VWA5B1Q5TIE3 1220 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 IRAK1BP1Q5VVH5 260 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 MRM1Q6IN84 353 aaKnown RBP18.7■□□□□ 0.58
COL9A3-202ENST00000452372 RIPOR1Q6ZS17 1223 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 GPR180Q86V85 440 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 HPS6Q86YV9 775 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 METTL4Q8N3J2 472 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 GBP7Q8N8V2 638 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-202ENST00000452372 KCNA7Q96RP8 456 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 LPAR4Q99677 370 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 MECRQ9BV79 373 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 MRPL1Q9BYD6 325 aaKnown RBP18.7■□□□□ 0.58
COL9A3-202ENST00000452372 LYARQ9NX58 379 aaKnown RBP18.7■□□□□ 0.58
COL9A3-202ENST00000452372 PHF11Q9UIL8 331 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 ADAM29Q9UKF5 820 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 CLDN16Q9Y5I7 305 aa18.7■□□□□ 0.58
COL9A3-202ENST00000452372 SERTM1A2A2V5 107 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 ALPPP05187 535 aa18.69■□□□□ 0.58
COL9A3-202ENST00000452372 CPN2P22792 545 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms