RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 RABL2BQ9UNT1 228 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 WNK2Q9Y3S1 2297 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 TMEM202A6NGA9 273 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 DEAF1O75398 565 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SERPINB7O75635 380 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 SEC31AO94979 1220 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 GP1BBP13224 206 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 TNFRSF8P28908 595 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 KIR2DL1P43626 348 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 OGDHQ02218 1023 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 LRRC70Q7Z2Q7 622 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 GHDCQ8N2G8 530 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 AADATQ8N5Z0 425 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 BAHD1Q8TBE0 780 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 MARVELD3Q96A59 401 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 MTERF1Q99551 399 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 XPR1Q9UBH6 696 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 MSRB2Q9Y3D2 182 aa5.38□□□□□ -1.55
CDC42BPA-209ENST00000448940 C19orf67A6NJJ6 358 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 HHLA1C9JL84 531 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 D6RAR5 112 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 MTRF1O75570 445 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 TGFB1P01137 390 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ITGA2BP08514 1039 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 MPC1LP0DKB6 136 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ID2Q02363 134 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 IL11RAQ14626 422 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 BEND6Q5SZJ8 279 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 IYDQ6PHW0 289 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 XKR5Q6UX68 686 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 DNAJC14Q6Y2X3 702 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 GPR26Q8NDV2 337 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR4K14Q8NGD5 310 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 XAGE5Q8WWM1 108 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 CEP19Q96LK0 163 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 TMEM27Q9HBJ8 222 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 IL26Q9NPH9 171 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 CD93Q9NPY3 652 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 STARD5Q9NSY2 213 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 A0A1B0GW55 424 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF208O43345 1280 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 DUX4L2P0CJ85 424 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 DUX4L3P0CJ86 424 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 DUX4L4P0CJ87 422 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 DUX4L5P0CJ88 424 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 DUX4L6P0CJ89 424 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 DUX4L7P0CJ90 424 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 NR2C1P13056 603 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 PCSK2P16519 638 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRDX3P30048 256 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 CRATP43155 626 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 NAGLUP54802 743 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 GMFBP60983 142 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 CBX3Q13185 183 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ENPP2Q13822 863 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 PAQR3Q6TCH7 311 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 MED25Q71SY5 747 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF808Q8N4W9 903 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 FAM26EQ8N5C1 309 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR1J4Q8NGS1 313 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 LMO3Q8TAP4 145 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 WBP2Q969T9 261 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 NKX3-1Q99801 234 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 DPH2Q9BQC3 489 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 IL37Q9NZH6 218 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 DUX4Q9UBX2 424 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 IL17BQ9UHF5 180 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 TRPS1Q9UHF7 1281 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF490Q9ULM2 529 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ACACBO00763 2458 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 SCN5AQ14524 2016 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 A0A1B0GX78 115 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR5K3A6NET4 321 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 RRM2P31350 389 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 NBL1P41271 181 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC6A9P48067 706 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 NIPAL4Q0D2K0 466 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 FCRLBQ6BAA4 426 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 MEPCEQ7L2J0 689 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 PM20D2Q8IYS1 436 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF619Q8N2I2 560 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ALG3Q92685 438 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 ESRP2Q9H6T0 727 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 CALML5Q9NZT1 146 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 LILRA5A6NI73 299 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 GSNP06396 782 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 MMP2P08253 660 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRSS56P0CW18 603 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 GFOD2Q3B7J2 385 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 AADACL2Q6P093 401 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 C17orf107Q6ZR85 190 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 KRT77Q7Z794 578 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR5AR1Q8NGP9 310 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 RP9Q8TA86 221 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 TSSK3Q96PN8 268 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 TSC22D3Q99576 134 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 SACM1LQ9NTJ5 587 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 DHCR7Q9UBM7 475 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 CISD3P0C7P0 127 aa5.37□□□□□ -1.55
CDC42BPA-209ENST00000448940 FDXRP22570 491 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms