RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 IL16Q14005 1332 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 C15orf38-AP3S2A0A0A6YYH1 394 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 CCDC162PA2VCL2 907 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 ERVV-2B6SEH9 535 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 XPO1O14980 1071 aaKnown RBP3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 TBX19O60806 448 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 CLN5O75503 358 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 CSDE1O75534 798 aaKnown RBP3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 TOM1L1O75674 476 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 MFN2O95140 757 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 SYNGR4O95473 234 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 ADCY5O95622 1261 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 TSHBP01222 138 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 ASNSP08243 561 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 SERPINF2P08697 491 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 RRASP10301 218 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 CLUP10909 449 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 CEACAM1P13688 526 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 CD59P13987 128 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 GNSP15586 552 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 ALDH1B1P30837 517 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 LINC01547P58512 204 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 HERV-K104P63124 156 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 MYBPC1Q00872 1141 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 FUT7Q11130 342 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 TRAP1Q12931 704 aaKnown RBP3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 CUL2Q13617 745 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZNF542PQ5EBM4 170 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 WDR38Q5JTN6 314 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 C20orf194Q5TEA3 1177 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 CORO6Q6QEF8 472 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 CDHR3Q6ZTQ4 885 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 PRSS35Q8N3Z0 413 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 KLHDC1Q8N7A1 406 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 TMEM99Q8N816 258 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 STKLD1Q8NE28 680 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 TRPV3Q8NET8 790 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 OR2T12Q8NG77 320 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 OR13C2Q8NGS9 318 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 OLIG1Q8TAK6 271 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 DNASE2BQ8WZ79 361 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 SEPT8Q92599 483 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 URM1Q9BTM9 101 aaKnown RBP3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 EDEM2Q9BV94 578 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 MTMR12Q9C0I1 747 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 RAVER2Q9HCJ3 691 aaKnown RBP3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 A4GALTQ9NPC4 353 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 FAM207AQ9NSI2 230 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 SLC38A7Q9NVC3 462 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 SLC12A6Q9UHW9 1150 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZDHHC2Q9UIJ5 367 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 PTBP2Q9UKA9 531 aaKnown RBP3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 STUB1Q9UNE7 303 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 CHMP2BQ9UQN3 213 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 CLASP1Q7Z460 1538 aa3.99□□□□□ -1.77
HMGB1P48-201ENST00000446155 KIF26BQ2KJY2 2108 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CTAGE15A4D2H0 777 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 ANKRD30BLA7E2S9 258 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 K7EQM0 130 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 OGTO15294 1046 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 SYT7O43581 403 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 APOHP02749 345 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 HMBSP08397 361 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 IQCF3P0C7M6 154 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 RPA2P15927 270 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CDH3P22223 829 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 PAICSP22234 425 aaKnown RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 IL4RP24394 825 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 EPHA2P29317 976 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 FCGR2BP31994 310 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 PRDX2P32119 198 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 ADRA1AP35348 466 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 TAGLN2P37802 199 aaKnown RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CLCN4P51793 760 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CLDN17P56750 224 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 PHEXP78562 749 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 DDX39BQ13838 428 aaKnown RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 PDK4Q16654 411 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 TPD52L1Q16890 204 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 ADPRMQ3LIE5 342 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 AGKQ53H12 422 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 ASPRV1Q53RT3 343 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 NCR3LG1Q68D85 454 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 ARHGAP17Q68EM7 881 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CCBE1Q6UXH8 406 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 ERASQ7Z444 233 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 BNIPLQ7Z465 357 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CTAGE6Q86UF2 777 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 GRAMD2AQ8IUY3 354 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 PLD3Q8IV08 490 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CCDC60Q8IWA6 550 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 EIF1ADQ8N9N8 165 aaKnown RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 RNF149Q8NC42 400 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 TRIM58Q8NG06 486 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 OR2T3Q8NH03 318 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CHPT1Q8WUD6 406 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 FCAMRQ8WWV6 532 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZNF524Q96C55 264 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 RAB39BQ96DA2 213 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 SLC47A1Q96FL8 570 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms