RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 LETMD1Q6P1Q0 360 aa11.52□□□□□ -0.57
LTBR-204ENST00000444814 PAPD4Q6PIY7 484 aaKnown RBP11.52□□□□□ -0.57
LTBR-204ENST00000444814 ISLR2Q6UXK2 745 aa11.52□□□□□ -0.57
LTBR-204ENST00000444814 JAZF1Q86VZ6 243 aa11.52□□□□□ -0.57
LTBR-204ENST00000444814 TMEM132CQ8N3T6 1108 aa11.52□□□□□ -0.57
LTBR-204ENST00000444814 FDCSPQ8NFU4 85 aa11.52□□□□□ -0.57
LTBR-204ENST00000444814 TCP10LQ8TDR4 215 aa11.52□□□□□ -0.57
LTBR-204ENST00000444814 DAZLQ92904 295 aaKnown RBP11.52□□□□□ -0.57
LTBR-204ENST00000444814 C8orf44Q96CB5 159 aa11.52□□□□□ -0.57
LTBR-204ENST00000444814 MTFMTQ96DP5 389 aaKnown RBP11.52□□□□□ -0.57
LTBR-204ENST00000444814 LMF1Q96S06 567 aa11.52□□□□□ -0.57
LTBR-204ENST00000444814 TRIM55Q9BYV6 548 aa11.52□□□□□ -0.57
LTBR-204ENST00000444814 DDX31Q9H8H2 851 aaKnown RBP11.52□□□□□ -0.57
LTBR-204ENST00000444814 PSME2Q9UL46 239 aa11.52□□□□□ -0.57
LTBR-204ENST00000444814 TP53TG5Q9Y2B4 290 aa11.52□□□□□ -0.57
LTBR-204ENST00000444814 UQCRHLA0A096LP55 91 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 DYTNA2CJ06 578 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 ANKRD33BA6NCL7 494 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 B8ZZF3 427 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 SAP18O00422 153 aaKnown RBP11.51□□□□□ -0.57
LTBR-204ENST00000444814 MANBAO00462 879 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 PLPP1O14494 284 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 SPAG7O75391 227 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 DNAJB5O75953 348 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 IFNA16P05015 189 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 UROSP10746 265 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 HOXB1P14653 301 aaPredicted RBP11.51□□□□□ -0.57
LTBR-204ENST00000444814 NEK2P51955 445 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 MAPK12P53778 367 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 TRA2BP62995 288 aaKnown RBP11.51□□□□□ -0.57
LTBR-204ENST00000444814 GALNT1Q10472 559 aaPredicted RBP11.51□□□□□ -0.57
LTBR-204ENST00000444814 RUNX2Q13950 521 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 BEND6Q5SZJ8 279 aaPredicted RBP11.51□□□□□ -0.57
LTBR-204ENST00000444814 CCNYL2Q5T2Q4 361 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 ABHD17BQ5VST6 288 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 C10orf107Q8IVU9 208 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 SLC5A8Q8N695 610 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 FAM47BQ8NA70 645 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 SUN3Q8TAQ9 357 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 AGAP11Q8TF27 550 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 METTL2AQ96IZ6 378 aaKnown RBP11.51□□□□□ -0.57
LTBR-204ENST00000444814 ART5Q96L15 291 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 SHCBP1LQ9BZQ2 653 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 ACBD3Q9H3P7 528 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 GSTO2Q9H4Y5 243 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 RPF2Q9H7B2 306 aaKnown RBP11.51□□□□□ -0.57
LTBR-204ENST00000444814 MLXIPLQ9NP71 852 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 KCNK9Q9NPC2 374 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 ADAP2Q9NPF8 381 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 ZNF71Q9NQZ8 489 aaPredicted RBP11.51□□□□□ -0.57
LTBR-204ENST00000444814 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.51□□□□□ -0.57
LTBR-204ENST00000444814 FBXW2Q9UKT8 454 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 CLCA3PQ9Y6N3 262 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 SEC16AO15027 2179 aa11.51□□□□□ -0.57
LTBR-204ENST00000444814 TCRBV16S1A1N1A0A5B0 115 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 SERTM1A2A2V5 107 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 BIRC5O15392 142 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 SH3BGRLO75368 114 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 B3GALT4O96024 378 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 PDYNP01213 254 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 FAM58BPP0C7Q3 252 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 PRR35P0CG20 571 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 NR2F6P10588 404 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 DDX5P17844 614 aaKnown RBP11.5□□□□□ -0.57
LTBR-204ENST00000444814 TSPAN8P19075 237 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 TNNI3P19429 210 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 PLIN5Q00G26 463 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 TNFRSF17Q02223 184 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 ACSM2AQ08AH3 577 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 PCOLCEQ15113 449 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 ELAVL1Q15717 326 aaKnown RBP11.5□□□□□ -0.57
LTBR-204ENST00000444814 ACSM2BQ68CK6 577 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 OR52E8Q6IFG1 317 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 ADNP2Q6IQ32 1131 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 PCSK4Q6UW60 755 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 ATG14Q6ZNE5 492 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 HDXQ7Z353 690 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 ANKRD13BQ86YJ7 626 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 NUDCD3Q8IVD9 361 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 SAMD14Q8IZD0 417 aaPredicted RBP11.5□□□□□ -0.57
LTBR-204ENST00000444814 METTL4Q8N3J2 472 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 RBM18Q96H35 190 aaKnown RBP11.5□□□□□ -0.57
LTBR-204ENST00000444814 ZNF354BQ96LW1 612 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 CCT7Q99832 543 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 KCNK13Q9HB14 408 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 MMP25Q9NPA2 562 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 NKIRAS1Q9NYS0 192 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 KMT2BQ9UMN6 2715 aaPredicted RBP11.5□□□□□ -0.57
LTBR-204ENST00000444814 SAGE2PA6NJ88 616 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 VGLL3A8MV65 326 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 FOXO6A8MYZ6 492 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 SLC28A1O00337 649 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 RTCAO00442 366 aaKnown RBP11.5□□□□□ -0.57
LTBR-204ENST00000444814 CYR61O00622 381 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 RGS14O43566 566 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 SEC24DO94855 1032 aaPredicted RBP11.5□□□□□ -0.57
LTBR-204ENST00000444814 GRK2P25098 689 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 ALDH3A1P30838 453 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 CASRP41180 1078 aa11.5□□□□□ -0.57
LTBR-204ENST00000444814 FOXL2P58012 376 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms