RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 EPPINO95925 133 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 CCL3P10147 92 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 CD53P19397 219 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 ZNF10P21506 573 aaPredicted RBP13.71□□□□□ -0.21
MRPL40-202ENST00000443660 CEACAM8P31997 349 aaPredicted RBP13.71□□□□□ -0.21
MRPL40-202ENST00000443660 AP1S2P56377 157 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 RAB38P57729 211 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 RNF4P78317 190 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 TBL3Q12788 808 aaKnown RBP13.71□□□□□ -0.21
MRPL40-202ENST00000443660 RUNX2Q13950 521 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 SLC22A10Q63ZE4 541 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 DRICH1Q6PGQ1 229 aaPredicted RBP13.71□□□□□ -0.21
MRPL40-202ENST00000443660 RAD9BQ6WBX8 426 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 SEM1Q6ZVN7 128 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 TNIP2Q8NFZ5 429 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 OR8K3Q8NH51 312 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 OR14A16Q8NHC5 309 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 TSNARE1Q96NA8 513 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 OR8D2Q9GZM6 311 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 SPNS1Q9H2V7 528 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 PELI2Q9HAT8 420 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 ACKR4Q9NPB9 350 aa13.71□□□□□ -0.21
MRPL40-202ENST00000443660 SEMA4BQ9NPR2 832 aaPredicted RBP13.71□□□□□ -0.21
MRPL40-202ENST00000443660 BOKQ9UMX3 212 aaPredicted RBP13.71□□□□□ -0.21
MRPL40-202ENST00000443660 ZNF407Q9C0G0 2248 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 B3GALT2O43825 422 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 ENDOUP21128 410 aaKnown RBP13.7□□□□□ -0.22
MRPL40-202ENST00000443660 TIMP3P35625 211 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 PIGAP37287 484 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 KCNJ2P63252 427 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 REEP5Q00765 189 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 STX4Q12846 297 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 RCN2Q14257 317 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 PAQR3Q6TCH7 311 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 NXPE4Q6UWF7 544 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 CLNKQ7Z7G1 428 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 KRTAP1-3Q8IUG1 177 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 LACC1Q8IV20 430 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 NAXEQ8NCW5 288 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 SIMC1Q8NDZ2 872 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 NEIL3Q8TAT5 605 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 GAL3ST3Q96A11 431 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 FBXL8Q96CD0 374 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 LINGO1Q96FE5 620 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 BDH2Q9BUT1 245 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 ALOXE3Q9BYJ1 711 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 EPB41L4BQ9H329 900 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 TSPY26PQ9H489 355 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 ZFP64Q9NPA5 681 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 VTI1BQ9UEU0 232 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 KCNE2Q9Y6J6 123 aa13.7□□□□□ -0.22
MRPL40-202ENST00000443660 HRNRQ86YZ3 2850 aaPredicted RBP13.7□□□□□ -0.22
MRPL40-202ENST00000443660 ZCWPW2A0A1B0GU75 182 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 CTAGE15A4D2H0 777 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 TGFBR3LH3BV60 316 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 CTNSO60931 367 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 H2AFYO75367 372 aaKnown RBP13.69□□□□□ -0.22
MRPL40-202ENST00000443660 GUCA1CO95843 209 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 IL2P60568 153 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 SORDQ00796 357 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 EFTUD2Q15029 972 aaKnown RBP eCLIP13.69□□□□□ -0.22
MRPL40-202ENST00000443660 SIX1Q15475 284 aaPredicted RBP13.69□□□□□ -0.22
MRPL40-202ENST00000443660 Q5PR19 223 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 CTAGE6Q86UF2 777 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 CAND1Q86VP6 1230 aaKnown RBP13.69□□□□□ -0.22
MRPL40-202ENST00000443660 FAM47BQ8NA70 645 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 GABPB2Q8TAK5 448 aaPredicted RBP13.69□□□□□ -0.22
MRPL40-202ENST00000443660 PTPMT1Q8WUK0 201 aaPredicted RBP13.69□□□□□ -0.22
MRPL40-202ENST00000443660 HSPBAP1Q96EW2 488 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 COX4I2Q96KJ9 171 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 NDNQ99608 321 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 FAM167BQ9BTA0 163 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 QPCTLQ9NXS2 382 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 COPS7AQ9UBW8 275 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 ZKSCAN5Q9Y2L8 839 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 CLDN16Q9Y5I7 305 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 VPS13CQ709C8 3753 aa13.69□□□□□ -0.22
MRPL40-202ENST00000443660 C15orf38-AP3S2A0A0A6YYH1 394 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 A0A0G2JN53 185 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 C4orf51C9J302 202 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 H7C1Q1 480 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 CASKO14936 926 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 SMAD7O15105 426 aaKnown RBP13.68□□□□□ -0.22
MRPL40-202ENST00000443660 ERI3O43414 337 aaKnown RBP13.68□□□□□ -0.22
MRPL40-202ENST00000443660 SMPD2O60906 423 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 RFPL3SP0C7P2 107 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 MLNP12872 115 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 HPDP32754 393 aaPredicted RBP13.68□□□□□ -0.22
MRPL40-202ENST00000443660 KCNJ1P48048 391 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 TRPC1P48995 793 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 HNRNPFP52597 415 aaKnown RBP13.68□□□□□ -0.22
MRPL40-202ENST00000443660 ASPHQ12797 758 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 POU4F3Q15319 338 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 MPEG1Q2M385 716 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 ACSF3Q4G176 576 aaPredicted RBP13.68□□□□□ -0.22
MRPL40-202ENST00000443660 HSP90AA5PQ58FG0 334 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 PIGGQ5H8A4 983 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 TMPRSS11BQ86T26 416 aa13.68□□□□□ -0.22
MRPL40-202ENST00000443660 THOC6Q86W42 341 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms