RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PPP6CO00743 305 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ABCB7O75027 752 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 UGT2B11O75310 529 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 NTRK1P04629 796 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 PGRP06401 933 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 HIST1H2AGP0C0S8 130 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 G6PDP11413 515 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 GLB1P16278 677 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 HIST1H2ADP20671 130 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 IDSP22304 550 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 NUDT1P36639 197 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ETV5P41161 510 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 MAGEA8P43361 318 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 AGTR2P50052 363 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 GZMMP51124 257 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 PPP2R2BQ00005 443 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 MVKQ03426 396 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 IMPG1Q17R60 797 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ISXQ2M1V0 245 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 TIGD2Q4W5G0 525 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 IYDQ6PHW0 289 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF765Q7L2R6 523 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 THAP5Q7Z6K1 395 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 AMIGO2Q86SJ2 522 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 DCP2Q8IU60 420 aaKnown RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ZC3H7AQ8IWR0 971 aaKnown RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 C8orf59Q8N0T1 100 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 TRAM1L1Q8N609 369 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 DDHD1Q8NEL9 900 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 OR52B6Q8NGF0 335 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 OR8J2Q8NGG1 315 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 RAB2BQ8WUD1 216 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ASB11Q8WXH4 323 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 REPS1Q96D71 796 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 WDR34Q96EX3 536 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 HIST1H2AHQ96KK5 128 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 HIST1H2AJQ99878 128 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 H2AFJQ9BTM1 129 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 NPLQ9BXD5 320 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 LRRN3Q9H3W5 708 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 KAT8Q9H7Z6 458 aaKnown RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 CCNB1IP1Q9NPC3 277 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ACSS2Q9NR19 701 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 SOHLH2Q9NX45 425 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF624Q9P2J8 865 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 BTNL2Q9UIR0 455 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 SLC17A4Q9Y2C5 497 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 TIMM22Q9Y584 194 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ORC6Q9Y5N6 252 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 CRYBG3Q68DQ2 2970 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 SCN2AQ99250 2005 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 LRRK2Q5S007 2527 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 SETXQ7Z333 2677 aaKnown RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 OR6C74A6NCV1 312 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 LRRC14BA6NHZ5 514 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 D6RAR5 112 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 H0YIV9 168 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 GSTA4O15217 222 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 CAPN5O15484 640 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 TLX3O43711 291 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 SEC14L2O76054 403 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 SLCO2B1O94956 709 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 SLC35G4P0C7Q5 338 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF883P0CG24 379 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 F3P13726 295 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ATP1B2P14415 290 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 RBMS1P29558 406 aaKnown RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 SLC5A2P31639 672 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 CSF2RBP32927 897 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 CSTF2P33240 577 aaKnown RBP eCLIP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ARL4DP49703 201 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 DUSP3P51452 185 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 KIAA1024LP59773 190 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 CXADRP78310 365 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 HPCAP84074 193 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 CFHR1Q03591 330 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 DPTQ07507 201 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 CAPRIN1Q14444 709 aaKnown RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ABRAXAS2Q15018 415 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 COL28A1Q2UY09 1125 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 LRRC23Q53EV4 343 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 LDLRAP1Q5SW96 308 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ANXA8L1Q5VT79 327 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 CPZQ66K79 652 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 SHQ1Q6PI26 577 aaKnown RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ADAMTSL4Q6UY14 1074 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF574Q6ZN55 896 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 RPS27LQ71UM5 84 aaKnown RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 GPR155Q7Z3F1 870 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 VRK3Q8IV63 474 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 DTWD1Q8N5C7 304 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 METTL27Q8N6F8 245 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 IL22RA1Q8N6P7 574 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 OR5AR1Q8NGP9 310 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 OR13F1Q8NGS4 319 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 BAHD1Q8TBE0 780 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 DNAJB14Q8TBM8 379 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 LKAAEAR1Q8TD35 194 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 MCOLN3Q8TDD5 553 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 MTERF3Q96E29 417 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms