RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CACNG4Q9UBN1 327 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 PPP2R2CQ9Y2T4 447 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 SESN1Q9Y6P5 492 aa2.28□□□□□ -2.04
HMGB1P18-201ENST00000438801 PRR14LQ5THK1 2151 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 ANKUB1A6NFN9 424 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 ASB14A6NK59 587 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 SRRM5B3KS81 715 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 CREB3O43889 395 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 RNASEH1O60930 286 aaKnown RBP2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 FRAT2O75474 233 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 TPPPO94811 219 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 TMEM63AO94886 807 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 PRLRP16471 622 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 SPAM1P38567 509 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 MATKP42679 507 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 TRA2BP62995 288 aaKnown RBP2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 ASIC1P78348 528 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 PRAMEP78395 509 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 KRT33BQ14525 404 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 PON2Q15165 354 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 TGIF1Q15583 401 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 MTHFSDQ2M296 383 aaKnown RBP2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 ITPRIPL2Q3MIP1 535 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 CHRFAM7AQ494W8 412 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 USH1GQ495M9 461 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 FAM98BQ52LJ0 330 aaKnown RBP2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 PRR30Q53SZ7 412 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 SLC25A53Q5H9E4 307 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 KIAA0930Q6ICG6 404 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 KLHL35Q6PF15 583 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 TMEM207Q6UWW9 146 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 ARMCX2Q7L311 632 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 VASH2Q86V25 355 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 SLC47A2Q86VL8 602 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 MEX3DQ86XN8 651 aaKnown RBP2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 TMEM139Q8IV31 216 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 DEFB119Q8N690 84 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 AQP11Q8NBQ7 271 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 MAPK15Q8TD08 544 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 LRRC15Q8TF66 581 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 RXFP2Q8WXD0 754 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 FGF13Q92913 245 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 SLC45A3Q96JT2 553 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 CMTM3Q96MX0 182 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 AGAP4Q96P64 663 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 LYSTQ99698 3801 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 BTBD10Q9BSF8 475 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 RTN4RQ9BZR6 473 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 GNB4Q9HAV0 340 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 CHMP1AQ9HD42 196 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 OSER1Q9NX31 292 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 P4HTMQ9NXG6 502 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 PRO0461Q9UI25 63 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 CORO1CQ9ULV4 474 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 GTF2A1LQ9UNN4 478 aa2.27□□□□□ -2.05
HMGB1P18-201ENST00000438801 NRCAMQ92823 1304 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 A0A1B0GVC2 190 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 A0A1W2PR77 199 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 A0A1W2PR80 420 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 TLCD2A6NGC4 264 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 ACOD1A6NK06 481 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 AVILO75366 819 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 ECI2O75521 394 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 RNASEH2AO75792 299 aaKnown RBP2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 OR2C1O95371 312 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 SEC24AO95486 1093 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 DDX58O95786 925 aaKnown RBP2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 ZFP36L1Q07352 338 aaKnown RBP2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 TRA2AQ13595 282 aaKnown RBP eCLIP2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 RNF212Q495C1 297 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 XKR3Q5GH77 459 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 TMTC3Q6ZXV5 915 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 COMMD2Q86X83 199 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 HIPK1Q86Z02 1210 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 CFAP206Q8IYR0 622 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 EID3Q8N140 333 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 TSTD1Q8NFU3 115 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 OR5M8Q8NGP6 311 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 RLN3Q8WXF3 142 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 C10orf90Q96M02 699 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 COL21A1Q96P44 957 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 APOL6Q9BWW8 343 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 MUC13Q9H3R2 512 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 MED20Q9H944 212 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 PPANQ9NQ55 473 aaKnown RBP2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 DIAPH3Q9NSV4 1193 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 NDE1Q9NXR1 346 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 SATB2Q9UPW6 733 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 PLEKHA6Q9Y2H5 1048 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 KMT2AQ03164 3969 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 MYO7BQ6PIF6 2116 aa2.26□□□□□ -2.05
HMGB1P18-201ENST00000438801 HMCN2Q8NDA2 5059 aa2.25□□□□□ -2.05
HMGB1P18-201ENST00000438801 FRMD3A2A2Y4 597 aa2.25□□□□□ -2.05
HMGB1P18-201ENST00000438801 HMGB1P1B2RPK0 211 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P18-201ENST00000438801 C3orf84H3BNL1 204 aa2.25□□□□□ -2.05
HMGB1P18-201ENST00000438801 PHOX2AO14813 284 aa2.25□□□□□ -2.05
HMGB1P18-201ENST00000438801 AP5Z1O43299 807 aa2.25□□□□□ -2.05
HMGB1P18-201ENST00000438801 GLRA3O75311 464 aa2.25□□□□□ -2.05
HMGB1P18-201ENST00000438801 LDOC1O95751 146 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms