RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 NME6O75414 186 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 JUNDP17535 347 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 OXTRP30559 389 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 PGDP52209 483 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 NUDT6P53370 316 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 IST1P53990 364 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLAMF1Q13291 335 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZNF846Q147U1 533 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 SMU1Q2TAY7 513 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 COLEC12Q5KU26 742 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLC9B2Q86UD5 537 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 PEX5LQ8IYB4 626 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 ADAMTS19Q8TE59 1207 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 MYADMQ96S97 322 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 ANKRD60Q9BZ19 345 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 KLHL1Q9NR64 748 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 PCDHGA2Q9Y5H1 932 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 TDRD15B5MCY1 1934 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 DUXAA6NLW8 204 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 K7ESM1 405 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 DLGAP1O14490 977 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 SCAMP2O15127 329 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 TAPBPO15533 448 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 TACR1P25103 407 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 CTHP32929 405 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 GSTM5P46439 218 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 CLCN2P51788 898 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 RAB25P57735 213 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZNF33BQ06732 778 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 PELI3Q8N2H9 469 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR10G2Q8NGC3 310 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR8K5Q8NH50 307 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 GEMIN6Q8WXD5 167 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 TFAP2CQ92754 450 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 APOBEC3BQ9UH17 382 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 PHF11Q9UIL8 331 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 ASB1Q9Y576 335 aa11.07□□□□□ -0.64
TRAPPC9-202ENST00000438773 C17orf113A0A1B0GUU1 675 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 PCP4L1A6NKN8 68 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 CENPXA8MT69 81 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 XPNPEP2O43895 674 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 CD160O95971 181 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 THEGLP0DJG4 465 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 NR2F6P10588 404 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 ARSFP54793 590 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZXDBP98169 803 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 ID2Q02363 134 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 MTAPQ13126 283 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 CCSMST1Q4G0I0 132 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 KHDRBS2Q5VWX1 349 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZC3H14Q6PJT7 736 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 LGI4Q8N135 537 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 DTWD1Q8N5C7 304 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 RLN3Q8WXF3 142 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 KCNS3Q9BQ31 491 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 TRPV5Q9NQA5 729 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 THUMPD1Q9NXG2 353 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 TCRBV3S1A0A5B6 114 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 KCNJ13O60928 360 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR1E2P47887 323 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 RPL6Q02878 288 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 TRIQKQ629K1 86 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 Q6ZNX1 250 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 CCDC80Q76M96 950 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 AKAP14Q86UN6 197 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 FUNDC1Q8IVP5 155 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 CENPSQ8N2Z9 138 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 C16orf78Q8WTQ4 265 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 KCNC2Q96PR1 638 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 INIPQ9NRY2 104 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 C5AR2Q9P296 337 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 CNOT11Q9UKZ1 510 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 ERGIC3Q9Y282 383 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 CA5BQ9Y2D0 317 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 LOC110117498-PIK3R3F6TDL0 507 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 H3BMQ9 156 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLCO2B1O94956 709 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 IFI30P13284 250 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 ANXA8P13928 327 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 CD300CQ08708 224 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 CYP27C1Q4G0S4 372 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 REEP3Q6NUK4 255 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZNF551Q7Z340 670 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLC30A8Q8IWU4 369 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 FAM20CQ8IXL6 584 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 RNFT2Q96EX2 444 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 COG8Q96MW5 612 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 GFM1Q96RP9 751 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLC6A17Q9H1V8 727 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 BRF2Q9HAW0 419 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 CDV3Q9UKY7 258 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 C2orf74A8MZ97 194 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 ETFAP13804 333 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 FPR1P21462 350 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 HRH2P25021 359 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 AVPR1BP47901 424 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 ALDH3A2P51648 485 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 TAP2Q03519 686 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 SPRED2Q7Z698 418 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms