RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 BORAQ6PGQ7 559 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 SLC30A9Q6PML9 568 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 ABI3BPQ7Z7G0 1075 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 OR2L5Q8NG80 312 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 ZFPM2Q8WW38 1151 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 MUS81Q96NY9 551 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 MBOAT4Q96T53 435 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 ABCG4Q9H172 646 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 PNMA8BQ9ULN7 279 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-216ENST00000437340 U3KQV3 271 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 KRBA1A5PL33 1030 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 HS6ST1O60243 411 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 GUCY1B2O75343 617 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 CHRNB1P11230 501 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 SLC9A5Q14940 896 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 CNPY1Q3B7I2 92 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 ZNF793Q6ZN11 406 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 Q6ZSR6 202 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 DCP2Q8IU60 420 aaKnown RBP24.42■■□□□ 1.5
CPNE1-216ENST00000437340 CCL4L1Q8NHW4 92 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 ADAMTS16Q8TE57 1224 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 LZICQ8WZA0 190 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 SRMSQ9H3Y6 488 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 KLHL31Q9H511 634 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 ANGPT4Q9Y264 503 aa24.42■■□□□ 1.5
CPNE1-216ENST00000437340 AQP1P29972 269 aa24.41■■□□□ 1.5
CPNE1-216ENST00000437340 ALDH3B2P48448 385 aa24.41■■□□□ 1.5
CPNE1-216ENST00000437340 PPP1R8Q12972 351 aaKnown RBP24.41■■□□□ 1.5
CPNE1-216ENST00000437340 KIR2DS3Q14952 304 aa24.41■■□□□ 1.5
CPNE1-216ENST00000437340 THAP5Q7Z6K1 395 aa24.41■■□□□ 1.5
CPNE1-216ENST00000437340 AMER3Q8N944 861 aa24.41■■□□□ 1.5
CPNE1-216ENST00000437340 NFKBIDQ8NI38 313 aa24.41■■□□□ 1.5
CPNE1-216ENST00000437340 REEP1Q9H902 201 aa24.41■■□□□ 1.5
CPNE1-216ENST00000437340 THEGQ9P2T0 379 aa24.41■■□□□ 1.5
CPNE1-216ENST00000437340 TMEFF2Q9UIK5 374 aaPredicted RBP24.41■■□□□ 1.5
CPNE1-216ENST00000437340 SNX8Q9Y5X2 465 aa24.41■■□□□ 1.5
CPNE1-216ENST00000437340 ERI3O43414 337 aaKnown RBP24.4■■□□□ 1.5
CPNE1-216ENST00000437340 HIST1H1TP22492 207 aaPredicted RBP24.4■■□□□ 1.5
CPNE1-216ENST00000437340 PRKACGP22612 351 aa24.4■■□□□ 1.5
CPNE1-216ENST00000437340 PCBP3P57721 371 aaKnown RBP24.4■■□□□ 1.5
CPNE1-216ENST00000437340 DSTNP60981 165 aa24.4■■□□□ 1.5
CPNE1-216ENST00000437340 ILF3Q12906 894 aaKnown RBP eCLIP24.4■■□□□ 1.57e-7■■■■■ 35.6
CPNE1-216ENST00000437340 NDUFAF5Q5TEU4 345 aa24.4■■□□□ 1.5
CPNE1-216ENST00000437340 MRM1Q6IN84 353 aaKnown RBP24.4■■□□□ 1.5
CPNE1-216ENST00000437340 PAQR7Q86WK9 346 aa24.4■■□□□ 1.5
CPNE1-216ENST00000437340 NRROSQ86YC3 692 aa24.4■■□□□ 1.5
CPNE1-216ENST00000437340 C8orf59Q8N0T1 100 aaPredicted RBP24.4■■□□□ 1.5
CPNE1-216ENST00000437340 EXOSC8Q96B26 276 aaKnown RBP24.4■■□□□ 1.5
CPNE1-216ENST00000437340 AMBRA1Q9C0C7 1298 aa24.4■■□□□ 1.5
CPNE1-216ENST00000437340 PRDM7Q9NQW5 492 aa24.4■■□□□ 1.5
CPNE1-216ENST00000437340 ZSCAN32Q9NX65 697 aa24.4■■□□□ 1.5
CPNE1-216ENST00000437340 DMTF1Q9Y222 760 aa24.4■■□□□ 1.5
CPNE1-216ENST00000437340 C19orf67A6NJJ6 358 aa24.39■■□□□ 1.5
CPNE1-216ENST00000437340 IGHV4-34P06331 123 aa24.39■■□□□ 1.5
CPNE1-216ENST00000437340 CASP9P55211 416 aa24.39■■□□□ 1.5
CPNE1-216ENST00000437340 RPS15AP62244 130 aaKnown RBP24.39■■□□□ 1.5
CPNE1-216ENST00000437340 KCNAB2Q13303 367 aa24.39■■□□□ 1.5
CPNE1-216ENST00000437340 PLCL1Q15111 1095 aa24.39■■□□□ 1.5
CPNE1-216ENST00000437340 KIAA0895LQ68EN5 471 aa24.39■■□□□ 1.5
CPNE1-216ENST00000437340 JPH3Q8WXH2 748 aaPredicted RBP24.39■■□□□ 1.5
CPNE1-216ENST00000437340 EPYCQ99645 322 aa24.39■■□□□ 1.5
CPNE1-216ENST00000437340 RBM38Q9H0Z9 239 aaKnown RBP24.39■■□□□ 1.5
CPNE1-216ENST00000437340 C6orf106Q9H6K1 298 aaPredicted RBP24.39■■□□□ 1.5
CPNE1-216ENST00000437340 SIRT3Q9NTG7 399 aaPredicted RBP24.39■■□□□ 1.5
CPNE1-216ENST00000437340 SAMHD1Q9Y3Z3 626 aaKnown RBP24.39■■□□□ 1.5
CPNE1-216ENST00000437340 MYO1GB0I1T2 1018 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 BTN3A3O00478 584 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 PPM1DO15297 605 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 SLC16A6O15403 523 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 OR6B1O95007 311 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 TNFP01375 233 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 ITGAMP11215 1152 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 HOXB3P14651 431 aaPredicted RBP24.39■■□□□ 1.49
CPNE1-216ENST00000437340 STXBP1P61764 594 aaKnown RBP24.39■■□□□ 1.49
CPNE1-216ENST00000437340 TGM3Q08188 693 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 IL18R1Q13478 541 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 IFI44LQ53G44 452 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 TOR1AIP1Q5JTV8 583 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 CEP68Q76N32 757 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 ZC3H7AQ8IWR0 971 aaKnown RBP24.39■■□□□ 1.49
CPNE1-216ENST00000437340 ACOT4Q8N9L9 421 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 NCSTNQ92542 709 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 ING2Q9H160 280 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 FBXL21Q9UKT6 434 aa24.39■■□□□ 1.49
CPNE1-216ENST00000437340 A0A0G2JN53 185 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 M0QX08 132 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 IGFBP5P24593 272 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 ATP5A1P25705 553 aaKnown RBP24.38■■□□□ 1.49
CPNE1-216ENST00000437340 NUDT1P36639 197 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 SLAMF1Q13291 335 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 KDM4DQ6B0I6 523 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 FAM180BQ6P0A1 224 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 FLCNQ8NFG4 579 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 OR13H1Q8NG92 308 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 GPBAR1Q8TDU6 330 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 TAMM41Q96BW9 452 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 ZNF347Q96SE7 839 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 A4GALTQ9NPC4 353 aa24.38■■□□□ 1.49
CPNE1-216ENST00000437340 DDX18Q9NVP1 670 aaKnown RBP24.38■■□□□ 1.49
CPNE1-216ENST00000437340 C5AR2Q9P296 337 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 1169.4 ms