RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 PLA2G16P53816 162 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 MGAT5Q09328 741 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 PMPCAQ10713 525 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 GTF3C1Q12789 2109 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 EFTUD2Q15029 972 aaKnown RBP eCLIP10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 GXYLT1Q4G148 440 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 PAOXQ6QHF9 649 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ADGRD1Q6QNK2 874 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 HSDL2Q6YN16 418 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ZNF793Q6ZN11 406 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 RTL4Q6ZR62 310 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 GK5Q6ZS86 529 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 FRA10AC1Q70Z53 315 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 UBE3DQ7Z6J8 389 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 KRT78Q8N1N4 520 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 FAM109AQ8N4B1 249 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 TMEM251Q8N6I4 163 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ZNF321PQ8N8H1 164 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 PDPRQ8NCN5 879 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 MORN4Q8NDC4 146 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 OR14A16Q8NHC5 309 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 SLC2A12Q8TD20 617 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 SGCZQ96LD1 299 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 FAM173AQ9BQD7 235 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 TTYH2Q9BSA4 534 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 CAPS2Q9BXY5 557 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 DEFB127Q9H1M4 99 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 CXXC4Q9H2H0 198 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 LIN28AQ9H9Z2 209 aaKnown RBP10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 IL1RL2Q9HB29 575 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 LYRM4Q9HD34 91 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 KCNJ16Q9NPI9 418 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 PRDM7Q9NQW5 492 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 CTNNAL1Q9UBT7 734 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ZNF490Q9ULM2 529 aaPredicted RBP10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ERVK-11Q9UQG0 969 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 L3MBTL1Q9Y468 752 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 CLCA3PQ9Y6N3 262 aa10.14□□□□□ -0.79
SPTLC1P4-201ENST00000435997 USP27XA6NNY8 438 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 NPIPA2E9PIF3 369 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 NPIPA3F8WFD2 350 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 WWP2O00308 870 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 H2AFYO75367 372 aaKnown RBP10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 IGKV3-11P04433 115 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 GLI4P10075 376 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 CCL3P10147 92 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 MAGEA5P43359 124 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 KCNC1P48547 511 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ARL4CP56559 192 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 RNF4P78317 190 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 IGLV3-21P80748 117 aaPredicted RBP10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 PLGLB1Q02325 96 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 SERTAD2Q14140 314 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 RCN2Q14257 317 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ZKSCAN8Q15776 578 aaPredicted RBP10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 MPEG1Q2M385 716 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 LYPD8Q6UX82 237 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 IL20RBQ6UXL0 311 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 TCAIMQ8N3R3 496 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 OR5M3Q8NGP4 307 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 NUBPLQ8TB37 319 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ZNF721Q8TF20 911 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 CCT6BQ92526 530 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 PTCD3Q96EY7 689 aaKnown RBP10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 KCNC2Q96PR1 638 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 EFCAB11Q9BUY7 163 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 MS4A8Q9BY19 250 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 SMYD2Q9NRG4 433 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 DNAJC11Q9NVH1 559 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 NSMCE4AQ9NXX6 385 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ATG4BQ9Y4P1 393 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 NF1P21359 2839 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 SETD2Q9BYW2 2564 aaPredicted RBP10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 MED13LQ71F56 2210 aa10.13□□□□□ -0.79
SPTLC1P4-201ENST00000435997 A0A0G2JNJ9 132 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ANKDD1BA6NHY2 528 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 NCF1BA6NI72 391 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 NCF1CA8MVU1 366 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 C17orf105B2RV13 164 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 G3V3Y1 287 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 SUSD5O60279 629 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 LDB3O75112 727 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 NADKO95544 446 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ETHE1O95571 254 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 C1QAP02745 245 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 CELA3AP09093 270 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 NCF1P14598 390 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 TCP1P17987 556 aaKnown RBP10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 CNR1P21554 472 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 DNAJA1P31689 397 aaKnown RBP10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ADH7P40394 386 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 DNASE1L1P49184 302 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 DLX5P56178 289 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 POU4F1Q01851 419 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 PCDH1Q08174 1060 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 ILF2Q12905 390 aaKnown RBP10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 DOC2AQ14183 400 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 OR4D1Q15615 310 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 TBCCQ15814 346 aa10.12□□□□□ -0.79
SPTLC1P4-201ENST00000435997 PDK4Q16654 411 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms