RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TSSK6Q9BXA6 273 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ATG5Q9H1Y0 275 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 TMEM9Q9P0T7 183 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 RNGTTO60942 597 aaKnown RBP10.79□□□□□ -0.68
SCN4A-201ENST00000435607 IL32P24001 234 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ENPP6Q6UWR7 440 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 OLFML1Q6UWY5 402 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 TTLL10Q6ZVT0 673 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 TPRA1Q86W33 373 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 AQP11Q8NBQ7 271 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF461Q8TAF7 563 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 PPM1HQ9ULR3 514 aa10.79□□□□□ -0.68
SCN4A-201ENST00000435607 EXOSC1Q9Y3B2 195 aaKnown RBP10.79□□□□□ -0.68
SCN4A-201ENST00000435607 A6NHS1 94 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 KDELR3O43731 214 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 ADORA3P0DMS8 318 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF43P17038 809 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 CBLP22681 906 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 PPM1JQ5JR12 505 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 C6orf52Q5T4I8 152 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF783Q6ZMS7 281 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 DPY19L4Q7Z388 723 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 C12orf65Q9H3J6 166 aaKnown RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 LIPT1Q9Y234 373 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 RNF215Q9Y6U7 377 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 PIK3C2BO00750 1634 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 LRRIQ1Q96JM4 1722 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 FER1L4A9Z1Z3 1794 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 LOC105369274A0A096LPK9 316 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 ARGFXA6NJG6 315 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 CLN5O75503 358 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 XRCC1P18887 633 aaPredicted RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 POU4F2Q12837 409 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 ARL6IP1Q15041 203 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF662Q6ZS27 426 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 OR4N4Q8N0Y3 316 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 POGLUT1Q8NBL1 392 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 KIAA1191Q96A73 305 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 R3HDM2Q9Y2K5 976 aaKnown RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 NAALAD2Q9Y3Q0 740 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 PCP4L1A6NKN8 68 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 NIPSNAP2O75323 286 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 CHRM5P08912 532 aaPredicted RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 IMPDH1P20839 514 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 ERP29P30040 261 aaKnown RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 MC3RP41968 323 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 LY6G5CQ5SRR4 150 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 XKRXQ6PP77 449 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 SNX29P2Q8IUI4 249 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 OR4N5Q8IXE1 308 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 ZDHHC14Q8IZN3 488 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 SCAMP5Q8TAC9 235 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 TARBP1Q13395 1621 aaKnown RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 CREBL2O60519 120 aaPredicted RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 ASGR2P07307 311 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 CFHP08603 1231 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 TMEM115Q12893 351 aaPredicted RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 GALNT10Q86SR1 603 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 ZBTB46Q86UZ6 589 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 TSGA13Q96PP4 275 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 A0A1W2PPM1 405 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 YJEFN3A6XGL0 299 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 RPS13P62277 151 aaKnown RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 NR0B2Q15466 257 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 REEP3Q6NUK4 255 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 AGTRAPQ6RW13 159 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 CSNK1A1LQ8N752 337 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 AGAP11Q8TF27 550 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 UCN3Q969E3 161 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 PGAP3Q96FM1 320 aaPredicted RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 CD320Q9NPF0 282 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 RIPK3Q9Y572 518 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 CLDN7O95471 211 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 C8orf89P0DMQ9 161 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 UQCRC2P22695 453 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 CCND3P30281 292 aaPredicted RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 DSC1Q08554 894 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF763Q0D2J5 394 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 NSDHLQ15738 373 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 SIRPB2Q5JXA9 342 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 EGFLAMQ63HQ2 1017 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 OR2T5Q6IEZ7 315 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 UBE2Q1Q7Z7E8 422 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 Q8N402 240 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 OR2T29Q8NH02 315 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 OR8K5Q8NH50 307 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 BBS10Q8TAM1 723 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 CASTOR1Q8WTX7 329 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 IL4I1Q96RQ9 567 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 HCAR1Q9BXC0 346 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 MEPEQ9NQ76 525 aaPredicted RBP10.78□□□□□ -0.68
SCN4A-201ENST00000435607 B3GNT2Q9NY97 397 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 MGAT4BQ9UQ53 548 aa10.78□□□□□ -0.68
SCN4A-201ENST00000435607 NOBOXO60393 691 aa10.77□□□□□ -0.68
SCN4A-201ENST00000435607 CST3P01034 146 aaPredicted RBP10.77□□□□□ -0.68
SCN4A-201ENST00000435607 SPATA31C1P0DKV0 1188 aa10.77□□□□□ -0.68
SCN4A-201ENST00000435607 PRKCAP17252 672 aa10.77□□□□□ -0.68
SCN4A-201ENST00000435607 MARCKSL1P49006 195 aa10.77□□□□□ -0.68
SCN4A-201ENST00000435607 PTP4A2Q12974 167 aa10.77□□□□□ -0.68
SCN4A-201ENST00000435607 MFSD13AQ14CX5 517 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms