RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 NFE2L1Q14494 772 aa2.55□□□□□ -2
CLK1-204ENST00000432425 KNOP1Q1ED39 458 aaKnown RBP2.55□□□□□ -2
CLK1-204ENST00000432425 RABL6Q3YEC7 729 aaPredicted RBP2.55□□□□□ -2
CLK1-204ENST00000432425 LBHQ53QV2 105 aaPredicted RBP2.55□□□□□ -2
CLK1-204ENST00000432425 C6orf136Q5SQH8 315 aa2.55□□□□□ -2
CLK1-204ENST00000432425 FHL5Q5TD97 284 aa2.55□□□□□ -2
CLK1-204ENST00000432425 OLFML2AQ68BL7 652 aa2.55□□□□□ -2
CLK1-204ENST00000432425 EMBQ6PCB8 327 aa2.55□□□□□ -2
CLK1-204ENST00000432425 CNSTQ6PJW8 725 aa2.55□□□□□ -2
CLK1-204ENST00000432425 CCDC186Q7Z3E2 898 aa2.55□□□□□ -2
CLK1-204ENST00000432425 SLFN11Q7Z7L1 901 aa2.55□□□□□ -2
CLK1-204ENST00000432425 PHLDB2Q86SQ0 1253 aa2.55□□□□□ -2
CLK1-204ENST00000432425 CCAR2Q8N163 923 aaKnown RBP2.55□□□□□ -2
CLK1-204ENST00000432425 ZNF540Q8NDQ6 660 aa2.55□□□□□ -2
CLK1-204ENST00000432425 RAD54LQ92698 747 aa2.55□□□□□ -2
CLK1-204ENST00000432425 SYAP1Q96A49 352 aaPredicted RBP2.55□□□□□ -2
CLK1-204ENST00000432425 ZNF396Q96N95 335 aaPredicted RBP2.55□□□□□ -2
CLK1-204ENST00000432425 TEX13BQ9BXU2 312 aa2.55□□□□□ -2
CLK1-204ENST00000432425 FAM129AQ9BZQ8 928 aa2.55□□□□□ -2
CLK1-204ENST00000432425 MARCH7Q9H992 704 aa2.55□□□□□ -2
CLK1-204ENST00000432425 WDR41Q9HAD4 459 aa2.55□□□□□ -2
CLK1-204ENST00000432425 CHCHD3Q9NX63 227 aaKnown RBP2.55□□□□□ -2
CLK1-204ENST00000432425 C6orf203Q9P0P8 240 aaPredicted RBP2.55□□□□□ -2
CLK1-204ENST00000432425 LAMP5Q9UJQ1 280 aa2.55□□□□□ -2
CLK1-204ENST00000432425 CFAP45Q9UL16 551 aa2.55□□□□□ -2
CLK1-204ENST00000432425 KNSTRNQ9Y448 316 aa2.55□□□□□ -2
CLK1-204ENST00000432425 MTF2Q9Y483 593 aaPredicted RBP2.55□□□□□ -2
CLK1-204ENST00000432425 CCL27Q9Y4X3 112 aa2.55□□□□□ -2
CLK1-204ENST00000432425 RPL37AP8A6NKH3 93 aa2.54□□□□□ -2
CLK1-204ENST00000432425 ANXA2P2A6NMY6 339 aa2.54□□□□□ -2
CLK1-204ENST00000432425 A8MU76 341 aa2.54□□□□□ -2
CLK1-204ENST00000432425 FLRT2O43155 660 aa2.54□□□□□ -2
CLK1-204ENST00000432425 KLHL41O60662 606 aa2.54□□□□□ -2
CLK1-204ENST00000432425 KIAA0754O94854 1291 aa2.54□□□□□ -2
CLK1-204ENST00000432425 APBB3O95704 486 aa2.54□□□□□ -2
CLK1-204ENST00000432425 MOCS2O96007 188 aaPredicted RBP2.54□□□□□ -2
CLK1-204ENST00000432425 THY1P04216 161 aa2.54□□□□□ -2
CLK1-204ENST00000432425 KRT13P13646 458 aa2.54□□□□□ -2
CLK1-204ENST00000432425 P4HA1P13674 534 aa2.54□□□□□ -2
CLK1-204ENST00000432425 FDPSP14324 419 aaKnown RBP2.54□□□□□ -2
CLK1-204ENST00000432425 ANPEPP15144 967 aa2.54□□□□□ -2
CLK1-204ENST00000432425 SLC1A4P43007 532 aa2.54□□□□□ -2
CLK1-204ENST00000432425 RPL34P49207 117 aaKnown RBP2.54□□□□□ -2
CLK1-204ENST00000432425 ADARP55265 1226 aaKnown RBP2.54□□□□□ -2
CLK1-204ENST00000432425 UBXN1Q04323 297 aa2.54□□□□□ -2
CLK1-204ENST00000432425 ZNF273Q14593 569 aa2.54□□□□□ -2
CLK1-204ENST00000432425 MAPK11Q15759 364 aa2.54□□□□□ -2
CLK1-204ENST00000432425 ECSCRQ19T08 205 aa2.54□□□□□ -2
CLK1-204ENST00000432425 TMEM44Q2T9K0 475 aa2.54□□□□□ -2
CLK1-204ENST00000432425 KRTAP13-3Q3SY46 172 aa2.54□□□□□ -2
CLK1-204ENST00000432425 ANKDD1AQ495B1 522 aa2.54□□□□□ -2
CLK1-204ENST00000432425 MUC21Q5SSG8 566 aa2.54□□□□□ -2
CLK1-204ENST00000432425 ATAD3CQ5T2N8 411 aa2.54□□□□□ -2
CLK1-204ENST00000432425 FAM46CQ5VWP2 391 aa2.54□□□□□ -2
CLK1-204ENST00000432425 ABRAXAS1Q6UWZ7 409 aa2.54□□□□□ -2
CLK1-204ENST00000432425 BTNL8Q6UX41 500 aa2.54□□□□□ -2
CLK1-204ENST00000432425 TBC1D21Q8IYX1 336 aa2.54□□□□□ -2
CLK1-204ENST00000432425 NUP93Q8N1F7 819 aa2.54□□□□□ -2
CLK1-204ENST00000432425 BANPQ8N9N5 519 aa2.54□□□□□ -2
CLK1-204ENST00000432425 NCOA7Q8NI08 942 aa2.54□□□□□ -2
CLK1-204ENST00000432425 KIAA1524Q8TCG1 905 aa2.54□□□□□ -2
CLK1-204ENST00000432425 ANKRD49Q8WVL7 239 aa2.54□□□□□ -2
CLK1-204ENST00000432425 NABP1Q96AH0 204 aa2.54□□□□□ -2
CLK1-204ENST00000432425 CABS1Q96KC9 395 aa2.54□□□□□ -2
CLK1-204ENST00000432425 TNFRSF13CQ96RJ3 184 aa2.54□□□□□ -2
CLK1-204ENST00000432425 SLC7A5P2Q9GIP4 190 aa2.54□□□□□ -2
CLK1-204ENST00000432425 UBQLN3Q9H347 655 aa2.54□□□□□ -2
CLK1-204ENST00000432425 FNDC4Q9H6D8 234 aaPredicted RBP2.54□□□□□ -2
CLK1-204ENST00000432425 LIN28AQ9H9Z2 209 aaKnown RBP2.54□□□□□ -2
CLK1-204ENST00000432425 DEPPQ9NTK1 212 aa2.54□□□□□ -2
CLK1-204ENST00000432425 CLEC5AQ9NY25 188 aa2.54□□□□□ -2
CLK1-204ENST00000432425 PIK3R4Q99570 1358 aa2.54□□□□□ -2
CLK1-204ENST00000432425 LMO7DNF2Z398 122 aa2.53□□□□□ -2
CLK1-204ENST00000432425 PPIP5K2O43314 1243 aa2.53□□□□□ -2
CLK1-204ENST00000432425 STAM2O75886 525 aa2.53□□□□□ -2
CLK1-204ENST00000432425 STMN1P16949 149 aa2.53□□□□□ -2
CLK1-204ENST00000432425 PBLDP30039 288 aaPredicted RBP2.53□□□□□ -2
CLK1-204ENST00000432425 MATKP42679 507 aa2.53□□□□□ -2
CLK1-204ENST00000432425 SLC1A3P43003 542 aa2.53□□□□□ -2
CLK1-204ENST00000432425 ZNF41P51814 821 aaPredicted RBP2.53□□□□□ -2
CLK1-204ENST00000432425 EVCP57679 992 aa2.53□□□□□ -2
CLK1-204ENST00000432425 Q1RN00 199 aa2.53□□□□□ -2
CLK1-204ENST00000432425 POM121L1PQ3SYA9 428 aa2.53□□□□□ -2
CLK1-204ENST00000432425 ZNF506Q5JVG8 444 aa2.53□□□□□ -2
CLK1-204ENST00000432425 SPOUT1Q5T280 376 aaKnown RBP2.53□□□□□ -2
CLK1-204ENST00000432425 MPP7Q5T2T1 576 aa2.53□□□□□ -2
CLK1-204ENST00000432425 RSBN1Q5VWQ0 802 aaPredicted RBP2.53□□□□□ -2
CLK1-204ENST00000432425 RAB12Q6IQ22 244 aa2.53□□□□□ -2
CLK1-204ENST00000432425 KDELC1Q6UW63 502 aa2.53□□□□□ -2
CLK1-204ENST00000432425 RAPH1Q70E73 1250 aa2.53□□□□□ -2
CLK1-204ENST00000432425 SERINC5Q86VE9 423 aa2.53□□□□□ -2
CLK1-204ENST00000432425 LRRC49Q8IUZ0 686 aa2.53□□□□□ -2
CLK1-204ENST00000432425 ZC3H3Q8IXZ2 948 aaKnown RBP2.53□□□□□ -2
CLK1-204ENST00000432425 MNS1Q8NEH6 495 aa2.53□□□□□ -2
CLK1-204ENST00000432425 KIF18AQ8NI77 898 aa2.53□□□□□ -2
CLK1-204ENST00000432425 SPATA18Q8TC71 538 aa2.53□□□□□ -2
CLK1-204ENST00000432425 BRSK1Q8TDC3 778 aa2.53□□□□□ -2
CLK1-204ENST00000432425 ITLN1Q8WWA0 313 aa2.53□□□□□ -2
CLK1-204ENST00000432425 ZNF606Q8WXB4 792 aa2.53□□□□□ -2
CLK1-204ENST00000432425 KRT35Q92764 455 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms