RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 SLC9A5Q14940 896 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 KIR2DS3Q14952 304 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 ZIK1Q3SY52 487 aaPredicted RBP15.82■□□□□ 0.12
USHBP1-203ENST00000431146 C18orf63Q68DL7 685 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 FBXO42Q6P3S6 717 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 TRIM40Q6P9F5 258 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 EID3Q8N140 333 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 FAM46DQ8NEK8 389 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 FBXL20Q96IG2 436 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 SMURF2Q9HAU4 748 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 SMPD3Q9NY59 655 aaPredicted RBP15.82■□□□□ 0.12
USHBP1-203ENST00000431146 VNN3Q9NY84 501 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 B4DGG1 531 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 G3V2T6 193 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 PGRMC2O15173 223 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 ALPPL2P10696 532 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 PRKACGP22612 351 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 UQCRC2P22695 453 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 PCGF2P35227 344 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 LSSP48449 732 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 PRIM2P49643 509 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 ARSFP54793 590 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 VLDLRP98155 873 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 ZNF750Q32MQ0 723 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 GCNT6Q5T4J0 391 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 FCRL6Q6DN72 434 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 SPESP1Q6UW49 350 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 CBLL1Q75N03 491 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 ZNF438Q7Z4V0 828 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 PARGQ86W56 976 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 ZC3H7AQ8IWR0 971 aaKnown RBP15.82■□□□□ 0.12
USHBP1-203ENST00000431146 ZCCHC7Q8N3Z6 543 aaKnown RBP15.82■□□□□ 0.12
USHBP1-203ENST00000431146 LRRC61Q9BV99 259 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 SPATA9Q9BWV2 254 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 NLNQ9BYT8 704 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 C1GALT1Q9NS00 363 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 EVA1BQ9NVM1 165 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 RPS6KA6Q9UK32 745 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 WBP11Q9Y2W2 641 aaKnown RBP15.82■□□□□ 0.12
USHBP1-203ENST00000431146 ASB4Q9Y574 426 aa15.82■□□□□ 0.12
USHBP1-203ENST00000431146 A0A1W2PR48 441 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 A0A1W2PS29 197 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 OR2A25A4D2G3 310 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 P2RX6O15547 441 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 SH3BP5O60239 455 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 NOBOXO60393 691 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 B4GALT2O60909 372 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 ERAL1O75616 437 aaKnown RBP15.81■□□□□ 0.12
USHBP1-203ENST00000431146 ZNF888P0CJ79 500 aaPredicted RBP15.81■□□□□ 0.12
USHBP1-203ENST00000431146 IL1RNP18510 177 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 STARD6P59095 220 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 RPS15AP62244 130 aaKnown RBP15.81■□□□□ 0.12
USHBP1-203ENST00000431146 BTN3A2P78410 334 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 SCARB2Q14108 478 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 LAPTM4AQ15012 233 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.81■□□□□ 0.12
USHBP1-203ENST00000431146 TNFAIP8L2Q6P589 184 aaPredicted RBP15.81■□□□□ 0.12
USHBP1-203ENST00000431146 FIGLAQ6QHK4 219 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 EIF3MQ7L2H7 374 aaKnown RBP15.81■□□□□ 0.12
USHBP1-203ENST00000431146 ZDHHC13Q8IUH4 622 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 OR5P2Q8WZ92 322 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 GUCD1Q96NT3 240 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 ANKRD60Q9BZ19 345 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 MIR1-1HGQ9H1L0 117 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 SIRT3Q9NTG7 399 aaPredicted RBP15.81■□□□□ 0.12
USHBP1-203ENST00000431146 POT1Q9NUX5 634 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 PADI4Q9UM07 663 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 SPAG17Q6Q759 2223 aa15.81■□□□□ 0.12
USHBP1-203ENST00000431146 CEP192Q8TEP8 1941 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 TBX19O60806 448 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 E2F6O75461 281 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 C8orf89P0DMQ9 161 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 TYRP1P17643 537 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 MAGEA2P43356 314 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 CYP27C1Q4G0S4 372 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 CYBRD1Q53TN4 286 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 RNF220Q5VTB9 566 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 FRMPD2BQ6IN97 320 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 KRT80Q6KB66 452 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 SZRD1Q7Z422 152 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 ASPGQ86U10 573 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 OFCC1Q8IZS5 231 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 ZCCHC10Q8TBK6 192 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 ZDHHC1Q8WTX9 485 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 EPS8L2Q9H6S3 715 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 IL1RAPQ9NPH3 570 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 HRASLS2Q9NWW9 162 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 LOC105369274A0A096LPK9 316 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 LOC102723532A0A0G2JNH3 316 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 TMEM229AB2RXF0 380 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 SEC24DO94855 1032 aaPredicted RBP15.8■□□□□ 0.12
USHBP1-203ENST00000431146 PGM3O95394 542 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 KRT75O95678 551 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 AIFM1O95831 613 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 ALPLP05186 524 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 SMIM18P0DKX4 95 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 TNFRSF1BP20333 461 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 GSTM2P28161 218 aa15.8■□□□□ 0.12
USHBP1-203ENST00000431146 FRKP42685 505 aaPredicted RBP15.8■□□□□ 0.12
USHBP1-203ENST00000431146 ALDH3A2P51648 485 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms