RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 B4GALT7Q9UBV7 327 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 SLC7A11Q9UPY5 501 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 SLC45A1Q9Y2W3 748 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 TMEM131LA2VDJ0 1609 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 A0A1W2PQU0 124 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 IGLON5A6NGN9 336 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 PDYNP01213 254 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 S1PR1P21453 382 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 FPR1P21462 350 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 ZNF550Q7Z398 422 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 KRTCAP2Q8N6L1 136 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 GPR22Q99680 433 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 TPSD1Q9BZJ3 242 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 CD320Q9NPF0 282 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 TAS2R10Q9NYW0 307 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 HEPACAM2A8MVW5 462 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 SOCS2O14508 198 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 SSX5O60225 188 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 GPX6P59796 221 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 PIGWQ7Z7B1 504 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 ATG5Q9H1Y0 275 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 SARDHQ9UL12 918 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 CAMTA1Q9Y6Y1 1673 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 LCHNA4D1U4 455 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 RAD51DO75771 328 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 PLEKHS1Q5SXH7 462 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 SWT1Q5T5J6 900 aaKnown RBP14.81□□□□□ -0.04
PTPRF-206ENST00000429895 SLC39A4Q6P5W5 647 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 KLHDC10Q6PID8 442 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 UBE2Q1Q7Z7E8 422 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 SLC25A44Q96H78 314 aaPredicted RBP14.81□□□□□ -0.04
PTPRF-206ENST00000429895 ENAMQ9NRM1 1142 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 DKK3Q9UBP4 350 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 C8BP07358 591 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 PHC1P78364 1004 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 EPGNQ6UW88 154 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 C15orf40Q8WUR7 153 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 DZANK1Q9NVP4 752 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 MATN2O00339 956 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 CARM1Q86X55 608 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 C2CD4AQ8NCU7 369 aaPredicted RBP14.8□□□□□ -0.04
PTPRF-206ENST00000429895 NKX2-4Q9H2Z4 354 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 APOBEC3BQ9UH17 382 aaKnown RBP14.8□□□□□ -0.04
PTPRF-206ENST00000429895 PLIN4Q96Q06 1357 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 C2orf78A6NCI8 922 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 H0YJX3 145 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 ZNF821O75541 412 aaPredicted RBP14.8□□□□□ -0.04
PTPRF-206ENST00000429895 OR2B3O76000 313 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 EPCAMP16422 314 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 EMX2Q04743 252 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 GLIS1Q8NBF1 620 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 GRPEL2Q8TAA5 225 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 SEC14L1Q92503 715 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 PGAM5Q96HS1 289 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 PEBP4Q96S96 227 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 ZBTB20Q9HC78 741 aaPredicted RBP14.8□□□□□ -0.04
PTPRF-206ENST00000429895 SRA1Q9HD15 236 aaKnown RBP14.8□□□□□ -0.04
PTPRF-206ENST00000429895 ZNF12P17014 697 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 STOMP27105 288 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 DCKP27707 260 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 RBMS1P29558 406 aaKnown RBP14.8□□□□□ -0.04
PTPRF-206ENST00000429895 PON2Q15165 354 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 PPP1R3AQ16821 1122 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 OR51A7Q8NH64 312 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 SFXN1Q9H9B4 322 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 ZDHHC18Q9NUE0 388 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 A0A1W2PP18 115 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 ADORA3P0DMS8 318 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 PEPDP12955 493 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 IRF2P14316 349 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 CD9P21926 228 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 SLC15A1P46059 708 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 HNRNPA0Q13151 305 aaKnown RBP14.8□□□□□ -0.04
PTPRF-206ENST00000429895 MLC1Q15049 377 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 SLC22A16Q86VW1 577 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 SPAG16Q8N0X2 631 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 STOML3Q8TAV4 291 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 FBRSL1Q9HCM7 1045 aaKnown RBP14.8□□□□□ -0.04
PTPRF-206ENST00000429895 TM9SF3Q9HD45 589 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 PTTG2Q9NZH5 202 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 UNC119BA6NIH7 251 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 SLC18A2Q05940 514 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 KCNC3Q14003 757 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 AAK1Q2M2I8 961 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 DPY19L3Q6ZPD9 716 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 ZNF761Q86XN6 746 aaPredicted RBP14.8□□□□□ -0.04
PTPRF-206ENST00000429895 THAP4Q8WY91 577 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 TIGARQ9NQ88 270 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 EPHA6Q9UF33 1036 aa14.8□□□□□ -0.04
PTPRF-206ENST00000429895 CNOT4O95628 575 aaKnown RBP14.79□□□□□ -0.04
PTPRF-206ENST00000429895 IFNA7P01567 189 aa14.79□□□□□ -0.04
PTPRF-206ENST00000429895 GNAO1P09471 354 aa14.79□□□□□ -0.04
PTPRF-206ENST00000429895 GGT2P36268 569 aa14.79□□□□□ -0.04
PTPRF-206ENST00000429895 ABHD18Q0P651 414 aa14.79□□□□□ -0.04
PTPRF-206ENST00000429895 GINS1Q14691 196 aa14.79□□□□□ -0.04
PTPRF-206ENST00000429895 ABRAXAS2Q15018 415 aa14.79□□□□□ -0.04
PTPRF-206ENST00000429895 SH3D19Q5HYK7 790 aa14.79□□□□□ -0.04
PTPRF-206ENST00000429895 TXNDC5Q8NBS9 432 aaKnown RBP14.79□□□□□ -0.04
PTPRF-206ENST00000429895 OR13C3Q8NGS6 347 aa14.79□□□□□ -0.04
PTPRF-206ENST00000429895 COQ8AQ8NI60 647 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 714.6 ms