RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 RLIMQ9NVW2 624 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 ACAD8Q9UKU7 415 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 RAB23Q9ULC3 237 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SSR3Q9UNL2 185 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 EP300Q09472 2414 aaPredicted RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 MYBPHLA2RUH7 354 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 LYRM1O43325 122 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 RGS14O43566 566 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SRCP12931 536 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 CR2P20023 1033 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 TACR1P25103 407 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 AZGP1P25311 298 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 PTGER3P43115 390 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 NUDT6P53370 316 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 CACNB2Q08289 660 aaPredicted RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 SP140Q13342 867 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 EXOSC2Q13868 293 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 IL27RAQ6UWB1 636 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 LIX1Q8N485 282 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 FAM98AQ8NCA5 519 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 C11orf65Q8NCR3 313 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 WDR48Q8TAF3 677 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 UCN3Q969E3 161 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 VOPP1Q96AW1 172 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 TIMP4Q99727 224 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SPATA5L1Q9BVQ7 753 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 NSUN3Q9H649 340 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 RDH14Q9HBH5 336 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SEMA4BQ9NPR2 832 aaPredicted RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 PCDHB16Q9NRJ7 776 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 ZSCAN32Q9NX65 697 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 MS4A12Q9NXJ0 267 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 ENPP4Q9Y6X5 453 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 TRAV19A0A0A6YYK7 116 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 OR51F1A6NGY5 319 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 A8MX80 341 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 INMT-MINDY4F8WBC2 141 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 DIRAS1O95057 198 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 TGM4P49221 684 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SNRPD2P62316 118 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 CDC42EP1Q00587 391 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SLC10A7Q0GE19 358 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 C1DQ13901 141 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 DSC3Q14574 896 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 GTDC1Q4AE62 458 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 FLYWCH1Q4VC44 716 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 PABPC1L2AQ5JQF8 200 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SLC27A1Q6PCB7 646 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SCIMPQ6UWF3 145 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 ADGRD2Q7Z7M1 963 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 MS4A15Q8N5U1 240 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 DTX3Q8N9I9 347 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 GOT1L1Q8NHS2 421 aaPredicted RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 ST8SIA4Q92187 359 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 ZBTB18Q99592 522 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 C16orf70Q9BSU1 422 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 FICDQ9BVA6 458 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 DPY30Q9C005 99 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 PDFQ9HBH1 243 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 FGF20Q9NP95 211 aaPredicted RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 TRPS1Q9UHF7 1281 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 CLCA3PQ9Y6N3 262 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SMIM28A0A1B0GU29 152 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PCDH7O60245 1069 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ZNF254O75437 659 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 CCNB2O95067 398 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 NFATC1O95644 943 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 DHFRP00374 187 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 SDC1P18827 310 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ATF4P18848 351 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 S100A3P33764 101 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 MAPKAPK2P49137 400 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 FLI1Q01543 452 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 DSG2Q14126 1118 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 NFE2L1Q14494 772 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PTGES3Q15185 160 aaKnown RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 SLC5A8Q8N695 610 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 SYT14Q8NB59 555 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 OR56B4Q8NH76 319 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PCED1BQ96HM7 432 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ABHD1Q96SE0 405 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ZNF649Q9BS31 505 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 CXCL16Q9H2A7 254 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 AGO3Q9H9G7 860 aaKnown RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 SLC28A3Q9HAS3 691 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 EQTNQ9NQ60 294 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 NPDC1Q9NQX5 325 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 TNFRSF10BO14763 440 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PEX14O75381 377 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 B3GALNT1O75752 331 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 DARSP14868 501 aaKnown RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 BDKRB1P46663 353 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 MECP2P51608 486 aaKnown RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 IL10RBQ08334 325 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 OCLNQ16625 522 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ZXDCQ2QGD7 858 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 EML3Q32P44 896 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 GARNL3Q5VVW2 1013 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 TCTN3Q6NUS6 607 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 LIPIQ6XZB0 460 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms