RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 SEMA4BQ9NPR2 832 aaPredicted RBP13.55□□□□□ -0.24
PDAP1-202ENST00000426447 GUCA1BQ9UMX6 200 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 KCNE2Q9Y6J6 123 aa13.55□□□□□ -0.24
PDAP1-202ENST00000426447 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.55□□□□□ -0.24
PDAP1-202ENST00000426447 SYNDIG1LA6NDD5 238 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 C4orf51C9J302 202 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 TGFBR3LH3BV60 316 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 H2AFYO75367 372 aaKnown RBP13.54□□□□□ -0.24
PDAP1-202ENST00000426447 FGGP02679 453 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 CCL3P10147 92 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 EPXP11678 715 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 PIGAP37287 484 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 HNRNPFP52597 415 aaKnown RBP13.54□□□□□ -0.24
PDAP1-202ENST00000426447 RNF4P78317 190 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 NKX6-1P78426 367 aaPredicted RBP13.54□□□□□ -0.24
PDAP1-202ENST00000426447 TIAL1Q01085 375 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDAP1-202ENST00000426447 FOXO1Q12778 655 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 PDAP1Q13442 181 aaKnown RBP13.54□□□□□ -0.24
PDAP1-202ENST00000426447 PCBP2Q15366 365 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDAP1-202ENST00000426447 SLC22A10Q63ZE4 541 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 KIF18BQ86Y91 864 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 ULK2Q8IYT8 1036 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 RELL2Q8NC24 303 aaPredicted RBP13.54□□□□□ -0.24
PDAP1-202ENST00000426447 LRRN4CLQ8ND94 238 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 TMEM52Q8NDY8 209 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 GABPB2Q8TAK5 448 aaPredicted RBP13.54□□□□□ -0.24
PDAP1-202ENST00000426447 GAL3ST3Q96A11 431 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 MDFIQ99750 246 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 SH3GL2Q99962 352 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 YIPF4Q9BSR8 244 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 ALOXE3Q9BYJ1 711 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 XAB2Q9HCS7 855 aaKnown RBP13.54□□□□□ -0.24
PDAP1-202ENST00000426447 SPRR3Q9UBC9 169 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 SLC22A14Q9Y267 594 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 ATG4BQ9Y4P1 393 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 ZNF407Q9C0G0 2248 aa13.54□□□□□ -0.24
PDAP1-202ENST00000426447 AKAP6Q13023 2319 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 ERI3O43414 337 aaKnown RBP13.53□□□□□ -0.24
PDAP1-202ENST00000426447 CTNSO60931 367 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 IL2RAP01589 272 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 HEXAP06865 529 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 ZNF75DP51815 510 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 CDKN2DP55273 166 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 DCAF7P61962 342 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 KCNJ2P63252 427 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 RCN2Q14257 317 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 SHEQ5VZ18 495 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 MAATS1Q7Z4T9 603 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 KLHDC8AQ8IYD2 350 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 ZNF321PQ8N8H1 164 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 TNIP2Q8NFZ5 429 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 OR14A16Q8NHC5 309 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 LINC01560Q8TB33 94 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 PTPMT1Q8WUK0 201 aaPredicted RBP13.53□□□□□ -0.24
PDAP1-202ENST00000426447 ARSGQ96EG1 525 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 JSRP1Q96MG2 331 aaPredicted RBP13.53□□□□□ -0.24
PDAP1-202ENST00000426447 RUNDC3BQ96NL0 473 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 AICDAQ9GZX7 198 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 HOMER3Q9NSC5 361 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 ZNF629Q9UEG4 869 aaPredicted RBP13.53□□□□□ -0.24
PDAP1-202ENST00000426447 VTI1BQ9UEU0 232 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 BOKQ9UMX3 212 aaPredicted RBP13.53□□□□□ -0.24
PDAP1-202ENST00000426447 PCDHGB3Q9Y5G1 929 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 CLDN16Q9Y5I7 305 aa13.53□□□□□ -0.24
PDAP1-202ENST00000426447 DNHD1Q96M86 4753 aa13.52□□□□□ -0.24
PDAP1-202ENST00000426447 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.52□□□□□ -0.25
PDAP1-202ENST00000426447 AHRRA9YTQ3 701 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 C17orf105B2RV13 164 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 ARHGEF9O43307 516 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 KRT14P02533 472 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 ENO2P09104 434 aaPredicted RBP13.52□□□□□ -0.25
PDAP1-202ENST00000426447 ENDOUP21128 410 aaKnown RBP13.52□□□□□ -0.25
PDAP1-202ENST00000426447 MAGEA6P43360 314 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 TRPC1P48995 793 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 PLA2G16P53816 162 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 ASPHQ12797 758 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 EFTUD2Q15029 972 aaKnown RBP eCLIP13.52□□□□□ -0.251e-8■■■■■ 48.5
PDAP1-202ENST00000426447 RBM20Q5T481 1227 aaKnown RBP13.52□□□□□ -0.25
PDAP1-202ENST00000426447 SEM1Q6ZVN7 128 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 C2CD4AQ8NCU7 369 aaPredicted RBP13.52□□□□□ -0.25
PDAP1-202ENST00000426447 MCUQ8NE86 351 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 TTLQ8NG68 377 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 OR8K3Q8NH51 312 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 NEIL3Q8TAT5 605 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 MS4A6EQ96DS6 147 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 SERPINB12Q96P63 405 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 REPIN1Q9BWE0 567 aaKnown RBP13.52□□□□□ -0.25
PDAP1-202ENST00000426447 EPB41L4BQ9H329 900 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 PLEKHF2Q9H8W4 249 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 COPS7BQ9H9Q2 264 aaPredicted RBP13.52□□□□□ -0.25
PDAP1-202ENST00000426447 ZFP64Q9NPA5 681 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 BEX4Q9NWD9 120 aaPredicted RBP13.52□□□□□ -0.25
PDAP1-202ENST00000426447 COPS7AQ9UBW8 275 aa13.52□□□□□ -0.25
PDAP1-202ENST00000426447 FBN3Q75N90 2809 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 C15orf38-AP3S2A0A0A6YYH1 394 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 LRIT2A6NDA9 550 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 KIAA1324LA8MWY0 1029 aaPredicted RBP13.51□□□□□ -0.25
PDAP1-202ENST00000426447 ZNF354AO60765 605 aaPredicted RBP13.51□□□□□ -0.25
PDAP1-202ENST00000426447 LY6G6DO95868 133 aa13.51□□□□□ -0.25
PDAP1-202ENST00000426447 EPPINO95925 133 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms