RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 C6orf132Q5T0Z8 1188 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 TMEM214Q6NUQ4 689 aaKnown RBP14.4□□□□□ -0.1
ACTB-204ENST00000425660 SLC48A1Q6P1K1 146 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 ABHD13Q7L211 337 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 EID3Q8N140 333 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 CLEC4FQ8N1N0 589 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 SLC25A45Q8N413 288 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 C19orf47Q8N9M1 422 aaKnown RBP14.4□□□□□ -0.1
ACTB-204ENST00000425660 UCN3Q969E3 161 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 EXOSC8Q96B26 276 aaKnown RBP14.4□□□□□ -0.1
ACTB-204ENST00000425660 PPWD1Q96BP3 646 aaKnown RBP14.4□□□□□ -0.1
ACTB-204ENST00000425660 ZNF570Q96NI8 536 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 SERINC2Q96SA4 455 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 UGT2B28Q9BY64 529 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 CXorf36Q9H7Y0 433 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 SLC35C2Q9NQQ7 365 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 PRDM9Q9NQV7 894 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 C1GALT1Q9NS00 363 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 UTS2RQ9UKP6 389 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 SH3BP5O60239 455 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 TNFRSF21O75509 655 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 NTRK1P04629 796 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 GIMD1P0DJR0 217 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 GNSP15586 552 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 ZNF10P21506 573 aaPredicted RBP14.39□□□□□ -0.11
ACTB-204ENST00000425660 BNC1Q01954 994 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 GRAMD1BQ3KR37 738 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 FAM98BQ52LJ0 330 aaKnown RBP14.39□□□□□ -0.11
ACTB-204ENST00000425660 SFT2D3Q587I9 215 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.39□□□□□ -0.11
ACTB-204ENST00000425660 FAM180BQ6P0A1 224 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 C1orf210Q8IVY1 113 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 FAM162AQ96A26 154 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 ELF4Q99607 663 aaPredicted RBP14.39□□□□□ -0.11
ACTB-204ENST00000425660 DPH2Q9BQC3 489 aaPredicted RBP14.39□□□□□ -0.11
ACTB-204ENST00000425660 CHID1Q9BWS9 393 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 RAD21L1Q9H4I0 556 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 TMEM38AQ9H6F2 299 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 FAM60AQ9NP50 221 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 SIRT3Q9NTG7 399 aaPredicted RBP14.39□□□□□ -0.11
ACTB-204ENST00000425660 TMEM74BQ9NUR3 256 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 KCMF1Q9P0J7 381 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 EPHA6Q9UF33 1036 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 DTNAQ9Y4J8 743 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 SNX11Q9Y5W9 270 aa14.39□□□□□ -0.11
ACTB-204ENST00000425660 NUP214P35658 2090 aaPredicted RBP14.39□□□□□ -0.11
ACTB-204ENST00000425660 NUDT21O43809 227 aaKnown RBP14.38□□□□□ -0.11
ACTB-204ENST00000425660 KRT75O95678 551 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 ZNF26P17031 533 aaPredicted RBP14.38□□□□□ -0.11
ACTB-204ENST00000425660 ALOX12P18054 663 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 CDH3P22223 829 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 CCT8P50990 548 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 RBBP4Q09028 425 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 C16orf72Q14CZ0 275 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 SHBQ15464 509 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 DGLUCYQ7Z3D6 616 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 ARHGEF39Q8N4T4 335 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 FAM86B1Q8N7N1 296 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 ARL10Q8N8L6 244 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 KLHL6Q8WZ60 621 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 NCLNQ969V3 563 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 EME1Q96AY2 570 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 NEURL3Q96EH8 262 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 CENPNQ96H22 339 aaPredicted RBP14.38□□□□□ -0.11
ACTB-204ENST00000425660 AMDHD1Q96NU7 426 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 SEPHS2Q99611 448 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 MAPKAP1Q9BPZ7 522 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 CHRNA10Q9GZZ6 450 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 SEMA6AQ9H2E6 1030 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 MAGIXQ9H6Y5 334 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 PILRBQ9UKJ0 227 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 ACSL6Q9UKU0 697 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 LRCH1Q9Y2L9 728 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 SLC22A7Q9Y694 548 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 TECTAO75443 2155 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 MYO1GB0I1T2 1018 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 H0YJX3 145 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 PGRMC2O15173 223 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 PRKRAO75569 313 aaKnown RBP14.38□□□□□ -0.11
ACTB-204ENST00000425660 SERPINA1P01009 418 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 NUDT7P0C024 238 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 KDELR2P33947 212 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 PCGF2P35227 344 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 DHPSP49366 369 aaPredicted RBP14.38□□□□□ -0.11
ACTB-204ENST00000425660 ARRB1P49407 418 aaPredicted RBP14.38□□□□□ -0.11
ACTB-204ENST00000425660 AQP4P55087 323 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 CHRNB3Q05901 458 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 BIRC2Q13490 618 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 ATP6AP1Q15904 470 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 PLK5Q496M5 336 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 DEFB134Q4QY38 66 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 COX20Q5RI15 118 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 SWT1Q5T5J6 900 aaKnown RBP14.38□□□□□ -0.11
ACTB-204ENST00000425660 SAXO2Q658L1 398 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 C18orf63Q68DL7 685 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 ENPP6Q6UWR7 440 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 AMIGO2Q86SJ2 522 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 CSNK1A1LQ8N752 337 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 C11orf65Q8NCR3 313 aa14.38□□□□□ -0.11
ACTB-204ENST00000425660 CNRIP1Q96F85 164 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms