RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ROR2Q01974 943 aaKnown RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 BLMHQ13867 455 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 PLGLAQ15195 96 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 SLC36A4Q6YBV0 504 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 RAB8BQ92930 207 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 FETUBQ9UGM5 382 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 ICKQ9UPZ9 632 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 OR1A2Q9Y585 309 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 ARPC2O15144 300 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 HNRNPA1P09651 372 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 NUDT6P53370 316 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 TSTQ16762 297 aaKnown RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 OR5L2Q8NGL0 311 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 TPT1P8Q9HAU6 139 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ATXN7L1Q9ULK2 861 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 GMEB1Q9Y692 573 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ZNF217O75362 1048 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ARL6IP5O75915 188 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 STOMP27105 288 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 DPP6P42658 865 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 OR1E2P47887 323 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SLC26A5P58743 744 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 TRAM2Q15035 370 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 RBM20Q5T481 1227 aaKnown RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 TMEM107Q6UX40 140 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SCGB1C1Q8TD33 95 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SLC22A4Q9H015 551 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 REEP4Q9H6H4 257 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ZNF701Q9NV72 531 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 STOX2Q9P2F5 926 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SALL4Q9UJQ4 1053 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 KCTD3Q9Y597 815 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 CREG1O75629 220 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 H6PDO95479 791 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SNAI1O95863 264 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ACRV1P26436 265 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 HADHBP55084 474 aaKnown RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 MERTKQ12866 999 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 DAG1Q14118 895 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ABRAXAS2Q15018 415 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 DEFB134Q4QY38 66 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 CYBRD1Q53TN4 286 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 FAM182AQ5T1J6 154 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SLC39A5Q6ZMH5 540 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ZNF783Q6ZMS7 281 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ZDHHC14Q8IZN3 488 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SMOQ99835 787 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SH2B3Q9UQQ2 575 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 NTSR1P30989 418 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 RABIFP47224 123 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 WSCD2Q2TBF2 565 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 LIPJQ5W064 366 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 IQCKQ8N0W5 287 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 GPR137CQ8N3F9 429 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 TWNKQ96RR1 684 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 TMEM109Q9BVC6 243 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 MVB12BQ9H7P6 319 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 DMAC2Q9NW81 257 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 DISC1C4P0D8 188 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 FAM163BP0C2L3 166 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ANXA3P12429 323 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 AGTR2P50052 363 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 STC1P52823 247 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SNU13P55769 128 aaKnown RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 HHEXQ03014 270 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 DLX2Q07687 328 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 PPP1R8Q12972 351 aaKnown RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 PAFAH1B3Q15102 231 aaKnown RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 CDCA2Q69YH5 1023 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 TRAM1L1Q8N609 369 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 PITX2Q99697 317 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 PIGRP01833 764 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SLC9A3P48764 834 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 DEFA5Q01523 94 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 CST6Q15828 149 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 CHRFAM7AQ494W8 412 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 FAM76BQ5HYJ3 339 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ZNF554Q86TJ5 538 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ZDHHC1Q8WTX9 485 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 TMBIM1Q969X1 311 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 TMEM80Q96HE8 168 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 HSH2DQ96JZ2 352 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ARHGAP39Q9C0H5 1083 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ATG5Q9H1Y0 275 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 ETAA1Q9NY74 926 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 FTCDNL1E5RQL4 147 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 TMEM63AO94886 807 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SEMA4FO95754 770 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 EEFSECP57772 596 aaKnown RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 EIF5AL1Q6IS14 154 aaKnown RBP10.79□□□□□ -0.68
PTCH1-205ENST00000418258 SORCS1Q8WY21 1168 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 DIO2Q92813 273 aa10.79□□□□□ -0.68
PTCH1-205ENST00000418258 GJE1A6NN92 205 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 ADORA3P0DMS8 318 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 IFNGR1P15260 489 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 MAGEA11P43364 429 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 GRK1Q15835 563 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 ABHD17BQ5VST6 288 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 RNF220Q5VTB9 566 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 PGAM5Q96HS1 289 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms