RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 SETDB1Q15047 1291 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 MAPKAPK3Q16644 382 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 GRHL2Q6ISB3 625 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 MDGA2Q7Z553 956 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 LURAP1LQ8IV03 231 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 ZNF595Q8IYB9 648 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 ACOT4Q8N9L9 421 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 ADAMTS18Q8TE60 1221 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 VMP1Q96GC9 406 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 ZNF717Q9BY31 904 aaPredicted RBP14.06□□□□□ -0.16
UBXN4-203ENST00000416538 OR51B5Q9H339 312 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 CDC42EP4Q9H3Q1 356 aaKnown RBP14.06□□□□□ -0.16
UBXN4-203ENST00000416538 ACSS3Q9H6R3 686 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 COPS7BQ9H9Q2 264 aaPredicted RBP14.06□□□□□ -0.16
UBXN4-203ENST00000416538 ZNF358Q9NW07 568 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 OPTCQ9UBM4 332 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 FBXW2Q9UKT8 454 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 ACOT9Q9Y305 439 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 PHF3Q92576 2039 aaKnown RBP14.06□□□□□ -0.16
UBXN4-203ENST00000416538 FBN2P35556 2912 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 PINLYPA6NC86 204 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 CCL21O00585 134 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 KLK8O60259 260 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 PRKRAO75569 313 aaKnown RBP14.05□□□□□ -0.16
UBXN4-203ENST00000416538 SIX3O95343 332 aaPredicted RBP14.05□□□□□ -0.16
UBXN4-203ENST00000416538 PTGER1P34995 402 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 MAGEA12P43365 314 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 MEOX1P50221 254 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 HNRNPH2P55795 449 aaKnown RBP14.05□□□□□ -0.16
UBXN4-203ENST00000416538 CKAP4Q07065 602 aaKnown RBP14.05□□□□□ -0.16
UBXN4-203ENST00000416538 LAPTM5Q13571 262 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 DDX39BQ13838 428 aaKnown RBP14.05□□□□□ -0.16
UBXN4-203ENST00000416538 ELAVL1Q15717 326 aaKnown RBP14.05□□□□□ -0.16
UBXN4-203ENST00000416538 UAP1Q16222 522 aaPredicted RBP14.05□□□□□ -0.16
UBXN4-203ENST00000416538 TECRLQ5HYJ1 363 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 PAGE2BQ5JRK9 111 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 MED27Q6P2C8 311 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 Q6ZPB1 254 aaPredicted RBP14.05□□□□□ -0.16
UBXN4-203ENST00000416538 TEX9Q8N6V9 391 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 HUS1BQ8NHY5 278 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 PTPMT1Q8WUK0 201 aaPredicted RBP14.05□□□□□ -0.16
UBXN4-203ENST00000416538 ANKRD9Q96BM1 317 aaPredicted RBP14.05□□□□□ -0.16
UBXN4-203ENST00000416538 KCNC2Q96PR1 638 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 FUT8Q9BYC5 575 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 LYRM4Q9HD34 91 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 DMRT3Q9NQL9 472 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 DEPPQ9NTK1 212 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 CSMD1Q96PZ7 3565 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 NINQ8N4C6 2090 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 LRBAP50851 2863 aa14.05□□□□□ -0.16
UBXN4-203ENST00000416538 A0A087X1B8 175 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 A0A088AWK7 358 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 A0A096LPK6 155 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 PRSS44E7EML9 344 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 PLPP1O14494 284 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 FGF17O60258 216 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 CTNSO60931 367 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 URI1O94763 535 aaPredicted RBP14.04□□□□□ -0.16
UBXN4-203ENST00000416538 ETHE1O95571 254 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 MYBL2P10244 700 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 ZNF24P17028 368 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 ZNF10P21506 573 aaPredicted RBP14.04□□□□□ -0.16
UBXN4-203ENST00000416538 HIST1H1TP22492 207 aaPredicted RBP14.04□□□□□ -0.16
UBXN4-203ENST00000416538 GPR85P60893 370 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 PFKFB4Q16877 469 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 KHDRBS2Q5VWX1 349 aaKnown RBP14.04□□□□□ -0.16
UBXN4-203ENST00000416538 DGAT2L6Q6ZPD8 337 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 SULF2Q8IWU5 870 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 CYP4Z2PQ8N1L4 340 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 RHEBL1Q8TAI7 183 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 ISL2Q96A47 359 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 TBCDQ9BTW9 1192 aa14.04□□□□□ -0.16
UBXN4-203ENST00000416538 MRPS33Q9Y291 106 aaKnown RBP14.04□□□□□ -0.16
UBXN4-203ENST00000416538 HCFC1P51610 2035 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 APCP25054 2843 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 ARHGAP10A1A4S6 786 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 CLDN4O14493 209 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 FCHO1O14526 889 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 ASNA1O43681 348 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 OR2J2O76002 312 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 OR6B1O95007 311 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 KLHL2O95198 593 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 ACSL3O95573 720 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 SOX3P41225 446 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 SSR2P43308 183 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 PIK3CGP48736 1102 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 SERPINB8P50452 374 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 HK2P52789 917 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 IGLV3-21P80748 117 aaPredicted RBP14.03□□□□□ -0.16
UBXN4-203ENST00000416538 WHAMMP3Q1A5X7 153 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 GOLGA7Q7Z5G4 137 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 RELL1Q8IUW5 271 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 OR4N5Q8IXE1 308 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 MMGT1Q8N4V1 131 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 HORMAD2Q8N7B1 307 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 SLC2A12Q8TD20 617 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 DOK4Q8TEW6 326 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 SLC44A1Q8WWI5 657 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 MAGED4Q96JG8 741 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 MTERF1Q99551 399 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms