RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 IKBIPQ70UQ0 350 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 TSPAN33Q86UF1 283 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 TMEM200AQ86VY9 491 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 PYROXD2Q8N2H3 581 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 CCDC185Q8N715 623 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 EMC1Q8N766 993 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 BCORP1Q8N888 145 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 RTL3Q8N8U3 475 aaKnown RBP4.34□□□□□ -1.71
PTPRK-210ENST00000415055 TMEM35BQ8NCS4 154 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 CHDHQ8NE62 594 aaPredicted RBP4.34□□□□□ -1.71
PTPRK-210ENST00000415055 TOR1AIP2Q8NFQ8 470 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 ABHD11Q8NFV4 315 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 EXD1Q8NHP7 514 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 LMO3Q8TAP4 145 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 XAGE5Q8WWM1 108 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 RAB40AQ8WXH6 277 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 ASB10Q8WXI3 467 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 NT5C3BQ969T7 300 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 R3HDM4Q96D70 268 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 CELF6Q96J87 481 aaKnown RBP4.34□□□□□ -1.71
PTPRK-210ENST00000415055 IP6K3Q96PC2 410 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 FCRL4Q96PJ5 515 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 RIOK2Q9BVS4 552 aaKnown RBP4.34□□□□□ -1.71
PTPRK-210ENST00000415055 NLNQ9BYT8 704 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 ABCG8Q9H221 673 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 RETREG1Q9H6L5 497 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 CATSPERBQ9H7T0 1116 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 FANCEQ9HB96 536 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 SEMA5BQ9P283 1151 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 LIMA1Q9UHB6 759 aaKnown RBP4.34□□□□□ -1.71
PTPRK-210ENST00000415055 BTRCQ9Y297 605 aa4.34□□□□□ -1.71
PTPRK-210ENST00000415055 PCYT1BQ9Y5K3 369 aaPredicted RBP4.34□□□□□ -1.71
PTPRK-210ENST00000415055 C17orf113A0A1B0GUU1 675 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 BECN2A8MW95 431 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 MYO1GB0I1T2 1018 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 PSMD11O00231 422 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 CES2O00748 559 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 PRAMEF11O60813 436 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 ALOX12BO75342 701 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 MTA2O94776 668 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 LCA5LO95447 670 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 IGHEP01854 428 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 EIF2S1P05198 315 aaKnown RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 PNMA6AP0CW24 399 aaPredicted RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 ZFXP17010 805 aaPredicted RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 LHCGRP22888 699 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 TEAD1P28347 426 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 FOLR3P41439 243 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 TSFMP43897 325 aaKnown RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 GABRB2P47870 512 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 MTNR1AP48039 350 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 ARCN1P48444 511 aaKnown RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 CSNK1DP48730 415 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 NDUFA8P51970 172 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 STX17P56962 302 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 TPI1P60174 286 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 AP1S1P61966 158 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 UBE2IP63279 158 aaKnown RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 TUBB4BP68371 445 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 OTUD4Q01804 1114 aaKnown RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 LRRC63Q05C16 580 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 RBPJQ06330 500 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 PNOCQ13519 176 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 STIM1Q13586 685 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 TUBB2AQ13885 445 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 GPR18Q14330 331 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 BECN1Q14457 450 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 NCF4Q15080 339 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 CYP1B1Q16678 543 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 GSTA3Q16772 222 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 ABHD17BQ5VST6 288 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 AGAP7PQ5VUJ5 663 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 TRNP1Q6NT89 227 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 XKRXQ6PP77 449 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 FAM198BQ6UWH4 519 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 FAM83HQ6ZRV2 1179 aaPredicted RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 Q6ZWC4 215 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 ZNF551Q7Z340 670 aaPredicted RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 TGIF2LYQ8IUE0 185 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 DSELQ8IZU8 1212 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 SLC38A9Q8NBW4 561 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 GPT2Q8TD30 523 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 PPP4R1Q8TF05 950 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 FAM172AQ8WUF8 416 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 RXFP2Q8WXD0 754 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 CNOT9Q92600 299 aaKnown RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 SNX21Q969T3 373 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 ECHDC3Q96DC8 303 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 C14orf79Q96F83 325 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 PGAM5Q96HS1 289 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 AGAP4Q96P64 663 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 PRR25Q96S07 402 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 MAP3K3Q99759 626 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 TUBB2BQ9BVA1 445 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 ELOVL1Q9BW60 279 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 TEX12Q9BXU0 123 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 MAK16Q9BXY0 300 aaKnown RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 TRIM31Q9BZY9 425 aa4.33□□□□□ -1.72
PTPRK-210ENST00000415055 ACTR5Q9H9F9 607 aaPredicted RBP4.33□□□□□ -1.72
PTPRK-210ENST00000415055 UCK1Q9HA47 277 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms