RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SMU1Q2TAY7 513 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 GALNT18Q6P9A2 607 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 MCATQ8IVS2 390 aaKnown RBP14.74□□□□□ -0.05
SHMT2-202ENST00000414700 DTWD1Q8N5C7 304 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 ZCCHC10Q8TBK6 192 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 GIPC3Q8TF64 312 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 RERGQ96A58 199 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-202ENST00000414700 PDE7BQ9NP56 450 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 ASIC5Q9NY37 505 aa14.74□□□□□ -0.05
SHMT2-202ENST00000414700 IGHV5-10-1A0A0J9YXX1 117 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 GNG14A0A1W2PPG7 69 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 SEMA3DO95025 777 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 LRATO95237 230 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 ANXA4P09525 319 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-202ENST00000414700 THRAP10827 490 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 ATP4BP51164 291 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 PWP1Q13610 501 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 PRSS41Q7RTY9 318 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 SHISA5Q8N114 240 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 CSNK1A1LQ8N752 337 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 TRIML2Q8N7C3 387 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 CDC26Q8NHZ8 85 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 COX4I2Q96KJ9 171 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 IRF2BPLQ9H1B7 796 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 SEMA5BQ9P283 1151 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 NTN3O00634 580 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-202ENST00000414700 ZNF888P0CJ79 500 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-202ENST00000414700 FOLR1P15328 257 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 ENTPD1P49961 510 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 HSD11B2P80365 405 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 RGS1Q08116 209 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 C16orf72Q14CZ0 275 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 CCDC157Q569K6 752 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 ABHD17CQ6PCB6 329 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 PRSS42Q7Z5A4 293 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 B3GNT8Q7Z7M8 397 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 OR2L5Q8NG80 312 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 OR4D9Q8NGE8 314 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 OR8K5Q8NH50 307 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 NT5CQ8TCD5 201 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 UTP15Q8TED0 518 aaKnown RBP14.73□□□□□ -0.05
SHMT2-202ENST00000414700 RGMAQ96B86 450 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 SLC41A2Q96JW4 573 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 PRDM7Q9NQW5 492 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 CNOT11Q9UKZ1 510 aaKnown RBP14.73□□□□□ -0.05
SHMT2-202ENST00000414700 DCHS1Q96JQ0 3298 aa14.73□□□□□ -0.05
SHMT2-202ENST00000414700 TMPRSS11DO60235 418 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 MED26O95402 600 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 NELFEP18615 380 aaKnown RBP14.72□□□□□ -0.05
SHMT2-202ENST00000414700 STT3AP46977 705 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 GPR19Q15760 415 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 ZC3H12BQ5HYM0 836 aaKnown RBP14.72□□□□□ -0.05
SHMT2-202ENST00000414700 OR4C11Q6IEV9 310 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 ASCL5Q7RTU5 278 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 SNX32Q86XE0 403 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 CHERPQ8IWX8 916 aaKnown RBP14.72□□□□□ -0.05
SHMT2-202ENST00000414700 MMP21Q8N119 569 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 CAMKVQ8NCB2 501 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 KLHL6Q8WZ60 621 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 THAP11Q96EK4 314 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 METTL2AQ96IZ6 378 aaKnown RBP14.72□□□□□ -0.05
SHMT2-202ENST00000414700 TMEM74Q96NL1 305 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 GFM1Q96RP9 751 aaKnown RBP14.72□□□□□ -0.05
SHMT2-202ENST00000414700 ZNF768Q9H5H4 540 aaKnown RBP14.72□□□□□ -0.05
SHMT2-202ENST00000414700 TBC1D23Q9NUY8 699 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 SIRT5Q9NXA8 310 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 KNTC1P50748 2209 aa14.72□□□□□ -0.05
SHMT2-202ENST00000414700 TMEM247A6NEH6 219 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 D6RAR5 112 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 AKAP10O43572 662 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 SLC22A3O75751 556 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 ACPPP15309 386 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 CAPN3P20807 821 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 SSR2P43308 183 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 PDX1P52945 283 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 STXBP1P61764 594 aaKnown RBP14.71□□□□□ -0.05
SHMT2-202ENST00000414700 MRPS22P82650 360 aaKnown RBP14.71□□□□□ -0.05
SHMT2-202ENST00000414700 MC1RQ01726 317 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 DEFB134Q4QY38 66 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 TMEM35AQ53FP2 167 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 TRIM40Q6P9F5 258 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 D2HGDHQ8N465 521 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.71□□□□□ -0.05
SHMT2-202ENST00000414700 RNF31Q96EP0 1072 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 CCDC74BQ96LY2 380 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 KCNC2Q96PR1 638 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 EXO1Q9UQ84 846 aaKnown RBP14.71□□□□□ -0.05
SHMT2-202ENST00000414700 FER1L5A0AVI2 2057 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 PRSS51A0A1B0GVH4 220 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 H0YJX3 145 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 NR5A2O00482 541 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 DNAJB6O75190 326 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 MYO1DO94832 1006 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 GP1BAP07359 652 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 SMIM10L1P0DMW3 83 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 PRPS2P11908 318 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 IL1RNP18510 177 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 CERS1P27544 350 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 MAPK1P28482 360 aa14.71□□□□□ -0.05
SHMT2-202ENST00000414700 ADSLP30566 484 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms