RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ALOX5P09917 674 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 POU3F3P20264 500 aaPredicted RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 RAB4AP20338 218 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 MAGP20916 626 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 AHRP35869 848 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 CAV3P56539 151 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 ABRAXAS2Q15018 415 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 KCTD21Q4G0X4 260 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 DEFB134Q4QY38 66 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 CATSPEREQ5SY80 951 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 OR4F3Q6IEY1 312 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 HIPK1Q86Z02 1210 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 TSPAN14Q8NG11 270 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 SUN5Q8TC36 379 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 NEIL2Q969S2 332 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 F2RL3Q96RI0 385 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 CLK4Q9HAZ1 481 aaKnown RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 CCNB1IP1Q9NPC3 277 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 PRTFDC1Q9NRG1 225 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 EMCNQ9ULC0 261 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 AP1M2Q9Y6Q5 423 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 PMF1-BGLAPU3KQ54 211 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 C9JVG2 144 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 VILLO15195 856 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 SRPX2O60687 465 aaPredicted RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 B4GALT2O60909 372 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM127O75204 238 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 APOL3O95236 402 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 HOXC4P09017 264 aaPredicted RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 BCKDHAP12694 445 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 FBLP22087 321 aaKnown RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 GUCA1AP43080 201 aaPredicted RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 ARPC4P59998 168 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 S100A12P80511 92 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 OTUD3Q5T2D3 398 aaPredicted RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 ZNF761Q86XN6 746 aaPredicted RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 KLHDC8AQ8IYD2 350 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 FAM160A2Q8N612 972 aaPredicted RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 EID2Q8N6I1 236 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 STON2Q8WXE9 905 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM74Q96NL1 305 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 CGREF1Q99674 301 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 TM9SF3Q9HD45 589 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 AIG1Q9NVV5 245 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 ANKMY1Q9P2S6 941 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 GNG13Q9P2W3 67 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 TIMM8BQ9Y5J9 83 aaPredicted RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 CAPN14A8MX76 684 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 E7ENX8 843 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 CD63P08962 238 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 ETS2P15036 469 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 RBMS1P29558 406 aaKnown RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 PGDP52209 483 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 CEBPGP53567 150 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 CRISP3P54108 245 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 GALK2Q01415 458 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 TAP2Q03519 686 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 MTAPQ13126 283 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 SLAMF1Q13291 335 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 C14orf28Q4W4Y0 310 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 COQ5Q5HYK3 327 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 FAAH2Q6GMR7 532 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 OR4C11Q6IEV9 310 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 KLHL17Q6TDP4 642 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 SBSNQ6UWP8 590 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM92Q6UXU6 159 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 HACD2Q6Y1H2 254 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 ASRGL1Q7L266 308 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 SLC29A4Q7RTT9 530 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 PEX5LQ8IYB4 626 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 MR1Q95460 341 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 MIEF2Q96C03 454 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 CLPTM1LQ96KA5 538 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 TEFMQ96QE5 360 aaKnown RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 GAL3ST4Q96RP7 486 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 KIR3DX1Q9H7L2 352 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 IFT80Q9P2H3 777 aaPredicted RBP8.15□□□□□ -1.1
SYNE1-211ENST00000413186 PCDHB3Q9Y5E6 796 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 CLIC1O00299 241 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 ZBTB11O95625 1053 aaPredicted RBP8.15□□□□□ -1.11
SYNE1-211ENST00000413186 IMPA1P29218 277 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 CLDN8P56748 225 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 UFM1P61960 85 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 GPLD1P80108 840 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 IL5RAQ01344 420 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 RAB32Q13637 225 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 CLCA4Q14CN2 919 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 GGTA1PQ4G0N0 100 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 C1orf210Q8IVY1 113 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 DEPDC4Q8N2C3 294 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 SVOPLQ8N434 492 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 OR5P2Q8WZ92 322 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 MCUBQ9NWR8 336 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 SLC17A4Q9Y2C5 497 aa8.15□□□□□ -1.11
SYNE1-211ENST00000413186 STATHP02808 62 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 CHRNB1P11230 501 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 DRD3P35462 400 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 ZSWIM7Q19AV6 140 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 SPANXN4Q5MJ08 99 aa8.14□□□□□ -1.11
SYNE1-211ENST00000413186 BROXQ5VW32 411 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms