RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TRMUO75648 421 aaKnown RBP12.92□□□□□ -0.34
LIMS1-205ENST00000410093 KLF8O95600 359 aaPredicted RBP12.92□□□□□ -0.34
LIMS1-205ENST00000410093 CLIC3O95833 236 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 TBX6O95947 436 aaPredicted RBP12.92□□□□□ -0.34
LIMS1-205ENST00000410093 ETFAP13804 333 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 NELFEP18615 380 aaKnown RBP12.92□□□□□ -0.34
LIMS1-205ENST00000410093 EEF1B2P24534 225 aaKnown RBP12.92□□□□□ -0.34
LIMS1-205ENST00000410093 DCKP27707 260 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 IST1P53990 364 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 MC1RQ01726 317 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 TEKQ02763 1124 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 KCNC4Q03721 635 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 NFATC4Q14934 902 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 SLC5A12Q1EHB4 618 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 MPEG1Q2M385 716 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 IQCCQ4KMZ1 466 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 KIAA1614Q5VZ46 1190 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 KIAA1211LQ6NV74 962 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 TMEM64Q6YI46 380 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 TMEM179BQ7Z7N9 219 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 SIX5Q8N196 739 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 CHDHQ8NE62 594 aaPredicted RBP12.92□□□□□ -0.34
LIMS1-205ENST00000410093 OR52E1Q8NGJ3 308 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 CREB3L4Q8TEY5 395 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 EZH1Q92800 747 aaPredicted RBP12.92□□□□□ -0.34
LIMS1-205ENST00000410093 WDR92Q96MX6 357 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 KCNC2Q96PR1 638 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 BCL7BQ9BQE9 202 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 RPP25Q9BUL9 199 aaKnown RBP12.92□□□□□ -0.34
LIMS1-205ENST00000410093 ROGDIQ9GZN7 287 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 IRF2BPLQ9H1B7 796 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 CXorf21Q9HAI6 301 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 PRDM9Q9NQV7 894 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 KRT84Q9NSB2 600 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 SCN3BQ9NY72 215 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 PDP1Q9P0J1 537 aaPredicted RBP12.92□□□□□ -0.34
LIMS1-205ENST00000410093 ANKMY1Q9P2S6 941 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 WNT16Q9UBV4 365 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 MAGED1Q9Y5V3 778 aaPredicted RBP12.92□□□□□ -0.34
LIMS1-205ENST00000410093 TRIOO75962 3097 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 A0A0A6YYD5 115 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 C5orf58C9J3I9 102 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 NARSO43776 548 aaKnown RBP12.91□□□□□ -0.34
LIMS1-205ENST00000410093 PDGFBP01127 241 aaPredicted RBP12.91□□□□□ -0.34
LIMS1-205ENST00000410093 GBAP04062 536 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 FUCA1P04066 466 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 JUNDP17535 347 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 HNRNPA2B1P22626 353 aaKnown RBP12.91□□□□□ -0.34
LIMS1-205ENST00000410093 SOAT1P35610 550 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 NUDT1P36639 197 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 SOX9P48436 509 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 HMGA2P52926 109 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 NUBP1P53384 320 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 TMBIM6P55061 237 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 CDH15P55291 814 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 STXBP1P61764 594 aaKnown RBP12.91□□□□□ -0.34
LIMS1-205ENST00000410093 RELAQ04206 551 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 SLC9A5Q14940 896 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 CLCA4Q14CN2 919 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 KCTD8Q6ZWB6 473 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 VTCN1Q7Z7D3 282 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 RNF130Q86XS8 419 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 LMNTD1Q8N9Z9 388 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 ATG16L2Q8NAA4 619 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 MFSD9Q8NBP5 474 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 OR2L3Q8NG85 312 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 SFXN5Q8TD22 340 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 DTNBP1Q96EV8 351 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 MPP4Q96JB8 637 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 ZNF300Q96RE9 604 aaPredicted RBP12.91□□□□□ -0.34
LIMS1-205ENST00000410093 PITX2Q99697 317 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 GABARAPL3Q9BY60 117 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 ADNPQ9H2P0 1102 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 POLR1BQ9H9Y6 1135 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 NDRG4Q9ULP0 352 aaKnown RBP12.91□□□□□ -0.34
LIMS1-205ENST00000410093 KCNK6Q9Y257 313 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 NAALAD2Q9Y3Q0 740 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 FAM32AQ9Y421 112 aaKnown RBP12.91□□□□□ -0.34
LIMS1-205ENST00000410093 HS3ST3A1Q9Y663 406 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 CFAP20Q9Y6A4 193 aaKnown RBP12.91□□□□□ -0.34
LIMS1-205ENST00000410093 U3KQV3 271 aa12.91□□□□□ -0.34
LIMS1-205ENST00000410093 A0A1B0GTW7 788 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 hCG_2039718K7EN88 272 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 EGFP01133 1207 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 NUDT7P0C024 238 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 RHCEP18577 417 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 NTSP30990 170 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 SSR2P43308 183 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 DAPP51397 102 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 RPS15AP62244 130 aaKnown RBP12.9□□□□□ -0.34
LIMS1-205ENST00000410093 MVKQ03426 396 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 ADCK2Q7Z695 626 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 CYP4Z1Q86W10 505 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 CACUL1Q86Y37 369 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 SAMD14Q8IZD0 417 aaPredicted RBP12.9□□□□□ -0.34
LIMS1-205ENST00000410093 C2orf73Q8N5S3 287 aaPredicted RBP12.9□□□□□ -0.34
LIMS1-205ENST00000410093 TTC29Q8NA56 475 aaPredicted RBP12.9□□□□□ -0.34
LIMS1-205ENST00000410093 ST13P5Q8NFI4 369 aaPredicted RBP12.9□□□□□ -0.34
LIMS1-205ENST00000410093 OR2L5Q8NG80 312 aa12.9□□□□□ -0.34
LIMS1-205ENST00000410093 NFKBIDQ8NI38 313 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms