RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CFAP206Q8IYR0 622 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 NRSN1Q8IZ57 195 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 OXR1Q8N573 874 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 AMER3Q8N944 861 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 SLC5A11Q8WWX8 675 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 PDXPQ96GD0 296 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 OPALINQ96PE5 141 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 ACAD8Q9UKU7 415 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 HCN2Q9UL51 889 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 UGT2A1Q9Y4X1 527 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 A0A1W2PPV9 198 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 H3BM21 787 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 ELFN1P0C7U0 828 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 BSGP35613 385 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 GAS1P54826 345 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 C2orf80Q0P641 193 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 C10orf62Q5T681 223 aaPredicted RBP9.38□□□□□ -0.91
MSH2-202ENST00000406134 UBE3DQ7Z6J8 389 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 OR9A1PQ8NGU1 263 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 MCFD2Q8NI22 146 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 SLC38A5Q8WUX1 472 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 GTPBP3Q969Y2 492 aaKnown RBP9.38□□□□□ -0.91
MSH2-202ENST00000406134 SLX1AQ9BQ83 275 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 OR2AG1Q9H205 316 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 MMP27Q9H306 513 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 SYNPO2LQ9H987 977 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 HHATLQ9HCP6 504 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 POLMQ9NP87 494 aaPredicted RBP9.38□□□□□ -0.91
MSH2-202ENST00000406134 ANKMY1Q9P2S6 941 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 SLC23A2Q9UGH3 650 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 KCNE2Q9Y6J6 123 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 ENPP4Q9Y6X5 453 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 A3GALT2U3KPV4 340 aa9.38□□□□□ -0.91
MSH2-202ENST00000406134 GPX5O75715 221 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 MFN2O95140 757 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 RHOP08100 348 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 ANXA8P13928 327 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 PNLIPRP1P54315 467 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 TUBA1BP68363 451 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 TP53BP2Q13625 1128 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 ZNF362Q5T0B9 420 aaPredicted RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 C9orf64Q5T6V5 341 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 NCCRP1Q6ZVX7 275 aaPredicted RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 TUBA1AQ71U36 451 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 SLC9B2Q86UD5 537 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 PLA2G15Q8NCC3 412 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 GEMIN6Q8WXD5 167 aaKnown RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 ANKHQ9HCJ1 492 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 FBXL12Q9NXK8 326 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 C4orf51C9J302 202 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 QSOX1O00391 747 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 MYO1DO94832 1006 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 CYP17A1P05093 508 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 ACRP10323 421 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 GTF2E2P29084 291 aaKnown RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 PIK3CBP42338 1070 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 IDH2P48735 452 aaKnown RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 HTRA4P83105 476 aaPredicted RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 EFNB1P98172 346 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 LRRC74AQ0VAA2 488 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 EIF4HQ15056 248 aaKnown RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 TOR1AIP1Q5JTV8 583 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 TCTN3Q6NUS6 607 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 CCDC190Q86UF4 302 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 AQP11Q8NBQ7 271 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 OR5AR1Q8NGP9 310 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 NEURL3Q96EH8 262 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 COL21A1Q96P44 957 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 MIR1-1HGQ9H1L0 117 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 SP140LQ9H930 580 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 C5AR2Q9P296 337 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 IRAK3Q9Y616 596 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 MYO7AQ13402 2215 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 IGKV1-8A0A0C4DH67 115 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 PSMD11O00231 422 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 RTCAO00442 366 aaKnown RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 HMGN4O00479 90 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 ARHGAP33O14559 1287 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 KMOO15229 486 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 CXCL14O95715 111 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 POLR2EP19388 210 aaKnown RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 ELAVL4P26378 380 aaKnown RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 CNR2P34972 360 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 FEN1P39748 380 aaKnown RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 PRKCDQ05655 676 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 FUT5Q11128 374 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 CAMK1Q14012 370 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 BCL2A1Q16548 175 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 ARMCX4Q5H9R4 360 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 C12orf73Q69YU5 71 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 CEACAM20Q6UY09 585 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 USP43Q70EL4 1123 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 BCDIN3DQ7Z5W3 292 aaKnown RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 ETFBKMTQ8IXQ9 262 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 PPCDCQ96CD2 204 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 TM4SF18Q96CE8 201 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 COX14Q96I36 57 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 EFCAB11Q9BUY7 163 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 CRISPLD2Q9H0B8 497 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 RUBCNLQ9H714 662 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms