RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 MAP4K2Q12851 820 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 MRPL28Q13084 256 aaKnown RBP8.77□□□□□ -1.01
HPS4-203ENST00000402105 SNAPC1Q16533 368 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 DCST1Q5T197 706 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 RFPL4BQ6ZWI9 263 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 CCDC190Q86UF4 302 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 TRAPPC5Q8IUR0 188 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 FAM46DQ8NEK8 389 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 OR2AP1Q8NGE2 309 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 SUN5Q8TC36 379 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 SLC9A6Q92581 669 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 OMA1Q96E52 524 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 SCLYQ96I15 445 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 WRAP53Q9BUR4 548 aaKnown RBP8.77□□□□□ -1.01
HPS4-203ENST00000402105 SUV39H2Q9H5I1 410 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 TRIM45Q9H8W5 580 aaPredicted RBP8.77□□□□□ -1.01
HPS4-203ENST00000402105 MARCH5Q9NX47 278 aa8.77□□□□□ -1.01
HPS4-203ENST00000402105 CCDC59Q9P031 241 aaKnown RBP8.77□□□□□ -1.01
HPS4-203ENST00000402105 ZNF282Q9UDV7 671 aaPredicted RBP8.77□□□□□ -1.01
HPS4-203ENST00000402105 RALGAPA2Q2PPJ7 1873 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 GREB1Q4ZG55 1949 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 LOC102723532A0A0G2JNH3 316 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 GALTP07902 379 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 MYL12AP19105 171 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 GPC1P35052 558 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 MANFP55145 182 aaKnown RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 PRKCZQ05513 592 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 INSL4Q14641 139 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 ZNF284Q2VY69 593 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 LINC00299Q6ZSB3 139 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 COMMD6Q7Z4G1 85 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 ELMOD2Q8IZ81 293 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 YIPF7Q8N8F6 280 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 CHAC2Q8WUX2 184 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 PLD4Q96BZ4 506 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 CLIP3Q96DZ5 547 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 TMEM80Q96HE8 168 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 FOPNLQ96NB1 174 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 GABARAPL3Q9BY60 117 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 RDH14Q9HBH5 336 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 HHATLQ9HCP6 504 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 ATP6V1HQ9UI12 483 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 MRPS7Q9Y2R9 242 aaKnown RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 HTTP42858 3142 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 GLOD5A6NK44 160 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 SGTAO43765 313 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 SLC28A2O43868 658 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 LZTS3O60299 673 aaPredicted RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 CATP04040 527 aaKnown RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 IL3P08700 152 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 SLC2A2P11168 524 aaPredicted RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 CSTF2P33240 577 aaKnown RBP eCLIP8.76□□□□□ -1.01
HPS4-203ENST00000402105 HNMTP50135 292 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 CTSCP53634 463 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 SLC16A1P53985 500 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 SRP54P61011 504 aaKnown RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 SNRPD1P62314 119 aaKnown RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 GPLD1P80108 840 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 CNTN1Q12860 1018 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 CRHR2Q13324 411 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 NCF4Q15080 339 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 GPAT3Q53EU6 434 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 Q5BKY6 102 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 CEP78Q5JTW2 689 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 LYPLAL1Q5VWZ2 237 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 BRAT1Q6PJG6 821 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 TPRG1Q6ZUI0 275 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 FLCNQ8NFG4 579 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 GEMIN6Q8WXD5 167 aaKnown RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 DHRS1Q96LJ7 313 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 NLNQ9BYT8 704 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 UCK2Q9BZX2 261 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 FAM83DQ9H4H8 585 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 KCNK12Q9HB15 430 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 BEX1Q9HBH7 125 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 GPATCH2Q9NW75 528 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 ANGPT4Q9Y264 503 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 KCNE1BA0A087WTH5 132 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 M0R3H8 397 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 SEPT4O43236 478 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 IFNA14P01570 189 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 GABRR2P28476 465 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 BUD31P41223 144 aaPredicted RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 RNF144AP50876 292 aaPredicted RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 MED27Q6P2C8 311 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 TMEM220Q6QAJ8 160 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 CHST9Q7L1S5 443 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 KRT74Q7RTS7 529 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 LAPTM4BQ86VI4 370 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 ZNF557Q8N988 423 aaPredicted RBP8.76□□□□□ -1.01
HPS4-203ENST00000402105 OR7G1Q8NGA0 311 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 OR8J2Q8NGG1 315 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 OR8H1Q8NGG4 311 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 CYB5D2Q8WUJ1 264 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 LRR1Q96L50 414 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 OR4K3Q96R72 315 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 NELL2Q99435 816 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 TBX5Q99593 518 aa8.76□□□□□ -1.01
HPS4-203ENST00000402105 ABCG4Q9H172 646 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms