RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 FAM71AQ8IYT1 594 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 C3orf49Q96BT1 292 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 RCOR3Q9P2K3 495 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 SALL4Q9UJQ4 1053 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 TESMINQ9Y4I5 508 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 LATS1O95835 1130 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 VMACQ2NL98 169 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 SHISA6Q6ZSJ9 500 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 TMED4Q7Z7H5 227 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 PYROXD2Q8N2H3 581 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 EPS8L1Q8TE68 723 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 BEX2Q9BXY8 128 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 SLC22A4Q9H015 551 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 BEX1Q9HBH7 125 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 MAN2C1Q9NTJ4 1040 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 P2RX2Q9UBL9 471 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 HHLA1C9JL84 531 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 NFKBIEO00221 500 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 DLDP09622 509 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 C6P13671 934 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 GSTM4Q03013 218 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 SLC18A2Q05940 514 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 GANABQ14697 944 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 KCTD19Q17RG1 926 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 TUBA3EQ6PEY2 450 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 TRIM73Q86UV7 250 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 XYLT1Q86Y38 959 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 TWIST2Q8WVJ9 160 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 FBXL8Q96CD0 374 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 PPM1MQ96MI6 270 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 TREX2Q9BQ50 279 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 SUCNR1Q9BXA5 334 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 ACTR6Q9GZN1 396 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 EIF5A2Q9GZV4 153 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 NANOGQ9H9S0 305 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 KCNMB3Q9NPA1 279 aa10.58□□□□□ -0.72
CACNA1C-210ENST00000399606 BORCS7-ASMTA0A0B4J1R7 106 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 MAGEB17A8MXT2 336 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ZNF670-ZNF695F2Z2N8 137 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 PMM2O15305 246 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ZNF280AP59817 542 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 STEAP3Q658P3 488 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 C15orf52Q6ZUT6 534 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 BORCS7Q96B45 105 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 TOE1Q96GM8 510 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 RNF39Q9H2S5 420 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 KCNIP1Q9NZI2 227 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 MCTS1Q9ULC4 181 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ZNF175Q9Y473 711 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 NPFFR2Q9Y5X5 522 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 PAHP00439 452 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 MGST1P10620 155 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 IFNGR1P15260 489 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 GKP32189 559 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 TARDBPQ13148 414 aaKnown RBP eCLIP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 RNF220Q5VTB9 566 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 TMPRSS7Q7RTY8 843 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 TRIB2Q92519 343 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 MECRQ9BV79 373 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ITM2CQ9NQX7 267 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ATRNL1Q5VV63 1379 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 LEFTY1O75610 366 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 SDHBP21912 280 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 RPL7AP62424 266 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ZNF648Q5T619 568 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 LCLAT1Q6UWP7 414 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ZNF461Q8TAF7 563 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 PIWIL1Q96J94 861 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 PCDH10Q9P2E7 1040 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 A0A0U1RQF3 1178 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 TGM5O43548 720 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ZNF30P17039 623 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 POU3F2P20265 443 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 DAOAP59103 153 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 DSTNP60981 165 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 TRIM61Q5EBN2 209 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 HAGHLQ6PII5 290 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 SLC44A3Q8N4M1 653 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 KLHL36Q8N4N3 616 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 GOLM1Q8NBJ4 401 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 STK35Q8TDR2 534 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 RLN3Q8WXF3 142 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ALG3Q92685 438 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 PEX11GQ96HA9 241 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 PGAM5Q96HS1 289 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 TM9SF2Q99805 663 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ARNT2Q9HBZ2 717 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 COMMD3Q9UBI1 195 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 KCPQ6ZWJ8 1503 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 GLOD5A6NK44 160 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 SLC22A2O15244 555 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 CILPO75339 1184 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 OR4F21O95013 312 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 RAC2P15153 192 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 S100PP25815 95 aa10.57□□□□□ -0.72
CACNA1C-210ENST00000399606 PTPRCAPQ14761 206 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms