RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 HCRTR2O43614 444 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 C9orf50Q5SZB4 431 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 ADGRD2Q7Z7M1 963 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 GLIS1Q8NBF1 620 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 OR5T2Q8NGG2 359 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 FBXO9Q9UK97 447 aaPredicted RBP13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 ORC5O43913 435 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 CKMT2P17540 419 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC25A11Q02978 314 aaKnown RBP13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 TMEM17Q86X19 198 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 MFSD6LQ8IWD5 586 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 TRPV4Q9HBA0 871 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 OR2AT4A6NND4 320 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 HSPA12AO43301 675 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 PEX14O75381 377 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 KCNJ11Q14654 390 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 MFSD2AQ8NA29 543 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 CMASQ8NFW8 434 aaPredicted RBP13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 OR4K1Q8NGD4 311 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 OR56A1Q8NGH5 318 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC35B2Q8TB61 432 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 CANT1Q8WVQ1 401 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 KCTD7Q96MP8 289 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 SOX9P48436 509 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 ZNF33AQ06730 810 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 MERTKQ12866 999 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 ASPGQ86U10 573 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 CCDC116Q8IYX3 515 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 CD180Q99467 661 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC17A9Q9BYT1 436 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 PCDHB14Q9Y5E9 798 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 TLX2O43763 284 aaPredicted RBP13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 NUDT1P36639 197 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 PLCXD2Q0VAA5 305 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 ST3GAL3Q11203 375 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 DAG1Q14118 895 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 SGCAQ16586 387 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 DUSP6Q16828 381 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 GPR149Q86SP6 731 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 OR9I1Q8NGQ6 314 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC46A2Q9BY10 475 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 MAGEE1Q9HCI5 957 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 IFT52Q9Y366 437 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 TIAM2Q8IVF5 1701 aa13.69□□□□□ -0.22
PCDHA11-201ENST00000398640 TSPAN9O75954 239 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 MRPL3P09001 348 aaKnown RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 TSTQ16762 297 aaKnown RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 DEFB133Q30KQ1 61 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 FLYWCH1Q4VC44 716 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 CWF19L1Q69YN2 538 aaKnown RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 CILP2Q8IUL8 1156 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 ZNF565Q8N9K5 539 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 OR8K3Q8NH51 312 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 CEP76Q8TAP6 659 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 HSH2DQ96JZ2 352 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 PEBP4Q96S96 227 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 MAP3K3Q99759 626 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 CD244Q9BZW8 370 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 DLGAP4Q9Y2H0 992 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 PLOD2O00469 737 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 HNRNPA2B1P22626 353 aaKnown RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 CD6P30203 668 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 EIF2S3P41091 472 aaKnown RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 MECP2P51608 486 aaKnown RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 OR8H3Q8N146 312 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 TRAM1L1Q8N609 369 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 TOE1Q96GM8 510 aaKnown RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 LAMP5Q9UJQ1 280 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 IFI30P13284 250 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 GABRA3P34903 492 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 TNFRSF4P43489 277 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 OR1E2P47887 323 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 FGL2Q14314 439 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 PON3Q15166 354 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 NR0B2Q15466 257 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 SSX6Q7RTT6 188 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 POFUT2Q9Y2G5 429 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 PCDHGB1Q9Y5G3 927 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 UBR3Q6ZT12 1888 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 J3QRK9 145 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC33A1O00400 549 aaPredicted RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 EEFSECP57772 596 aaKnown RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 MRPL49Q13405 166 aaKnown RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 MAD2L1BPQ15013 274 aaPredicted RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 GALNT10Q86SR1 603 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 SLITRK4Q8IW52 837 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 ZNF334Q9HCZ1 680 aaPredicted RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 ATXN7L1Q9ULK2 861 aaPredicted RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 BCORQ6W2J9 1755 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 FAM159BA6NKW6 160 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC2A2P11168 524 aaPredicted RBP13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 GSTM3P21266 225 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 PRKACGP22612 351 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 GPX6P59796 221 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 HHEXQ03014 270 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 MOGSQ13724 837 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 LIN52Q52LA3 116 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 SPANXN4Q5MJ08 99 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 ALPK1Q96QP1 1244 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms