RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 USP43Q70EL4 1123 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 HCSTQ9UBK5 93 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 NUP50Q9UKX7 468 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 RNH1P13489 461 aaKnown RBP10.9□□□□□ -0.66
TTC28-201ENST00000397906 SLC6A6P31641 620 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 NR0B2Q15466 257 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 RNF220Q5VTB9 566 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 PYURFQ96I23 114 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 TRIM36Q9NQ86 728 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 PRSS51A0A1B0GVH4 220 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 SRRM3A6NNA2 597 aaPredicted RBP10.9□□□□□ -0.66
TTC28-201ENST00000397906 ZNF99A8MXY4 864 aaPredicted RBP10.9□□□□□ -0.66
TTC28-201ENST00000397906 ADORA3P0DMS8 318 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 MYH6P13533 1939 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 C18orf21Q32NC0 220 aaPredicted RBP10.9□□□□□ -0.66
TTC28-201ENST00000397906 MND1Q9BWT6 205 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 RFXAPO00287 272 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 SOCS2O14508 198 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 PTGESO14684 152 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 C1GALT1C1LP0DN25 315 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 TMEM44Q2T9K0 475 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 CYBRD1Q53TN4 286 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 ZNF227Q86WZ6 799 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 PRR22Q8IZ63 422 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 C10orf82Q8WW14 230 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 FN3KQ9H479 309 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 KCMF1Q9P0J7 381 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 FBXO9Q9UK97 447 aaPredicted RBP10.9□□□□□ -0.66
TTC28-201ENST00000397906 A8MVJ9 347 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 CREG1O75629 220 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 UQCRC2P22695 453 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 VAMP1P23763 118 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 TPRG1LQ5T0D9 272 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 TAS1R1Q7RTX1 841 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 MARCH9Q86YJ5 346 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 PLD6Q8N2A8 252 aaKnown RBP10.9□□□□□ -0.66
TTC28-201ENST00000397906 HPF1Q9NWY4 346 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 BPIP17213 487 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 RAB43Q86YS6 212 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 IMP4Q96G21 291 aaKnown RBP10.9□□□□□ -0.66
TTC28-201ENST00000397906 HEMK1Q9Y5R4 338 aaPredicted RBP10.9□□□□□ -0.66
TTC28-201ENST00000397906 CHD2O14647 1828 aaKnown RBP10.9□□□□□ -0.66
TTC28-201ENST00000397906 E2F3O00716 465 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 CDH11P55287 796 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 EEFSECP57772 596 aaKnown RBP10.9□□□□□ -0.66
TTC28-201ENST00000397906 OR4C11Q6IEV9 310 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 C14orf105Q9NVL8 296 aa10.9□□□□□ -0.66
TTC28-201ENST00000397906 LDLRAD1Q5T700 205 aa10.9□□□□□ -0.67
TTC28-201ENST00000397906 ZDHHC14Q8IZN3 488 aa10.9□□□□□ -0.67
TTC28-201ENST00000397906 GADD45AP24522 165 aa10.9□□□□□ -0.67
TTC28-201ENST00000397906 SFTPDP35247 375 aa10.9□□□□□ -0.67
TTC28-201ENST00000397906 GRIK2Q13002 908 aa10.9□□□□□ -0.67
TTC28-201ENST00000397906 EXOC3L2Q2M3D2 409 aa10.9□□□□□ -0.67
TTC28-201ENST00000397906 CASD1Q96PB1 797 aa10.9□□□□□ -0.67
TTC28-201ENST00000397906 OR51B6Q9H340 312 aa10.9□□□□□ -0.67
TTC28-201ENST00000397906 SARDHQ9UL12 918 aa10.9□□□□□ -0.67
TTC28-201ENST00000397906 BACE2Q9Y5Z0 518 aa10.9□□□□□ -0.67
TTC28-201ENST00000397906 LOC100130705A0A1B0GUX0 176 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 ZNF821O75541 412 aaPredicted RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 RORAP35398 523 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 CXCL12P48061 93 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 LIPJQ5W064 366 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 KCTD7Q96MP8 289 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 TRIM64BA6NI03 449 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 FOXN2P32314 431 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 FGF13Q92913 245 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 ZDHHC18Q9NUE0 388 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 OR52A4PA6NMU1 304 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 SLC33A1O00400 549 aaPredicted RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 DRD1P21728 446 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 EIF4HQ15056 248 aaKnown RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 TRAPPC6BQ86SZ2 158 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 GALNT11Q8NCW6 608 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 GRK5P34947 590 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 MERTKQ12866 999 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 TSTQ16762 297 aaKnown RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 HERPUD2Q9BSE4 406 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 SOX30O94993 753 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 RAB33AQ14088 237 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 PTGR1Q14914 329 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 SLC2A11Q9BYW1 496 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 CCNKO75909 580 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 CD36P16671 472 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 UBE2NP61088 152 aaKnown RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 FRMD7Q6ZUT3 714 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 ZNF550Q7Z398 422 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 OR56A3Q8NH54 315 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 TCEAL4Q96EI5 215 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 HSPA12BQ96MM6 686 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 TMEM265A0A087WTH1 108 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 HNRNPA2B1P22626 353 aaKnown RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 MAOBP27338 520 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 NAA10P41227 235 aaPredicted RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 STK11Q15831 433 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 C5AR2Q9P296 337 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 RBMX2Q9Y388 322 aaKnown RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 ZSCAN5BA6NJL1 495 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 RLN2P04090 185 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 SLC36A4Q6YBV0 504 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 OR51G2Q8NGK0 314 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms