RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SLC6A2P23975 617 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 CDKN2CP42773 168 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 ZFP36L1Q07352 338 aaKnown RBP26■■□□□ 1.75
CPNE1-203ENST00000397442 FOXM1Q08050 763 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 SPIDRQ14159 915 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 NDUFA9Q16795 377 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 LRIF1Q5T3J3 769 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 PGM2L1Q6PCE3 622 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 MSRB3Q8IXL7 192 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 OR5T3Q8NGG3 340 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 CCDC115Q96NT0 180 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 CDRT15Q96T59 188 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 MMADHCQ9H3L0 296 aaPredicted RBP26■■□□□ 1.75
CPNE1-203ENST00000397442 LYRM4Q9HD34 91 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 SLC25A37Q9NYZ2 338 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 BTNL2Q9UIR0 455 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 PRPF19Q9UMS4 504 aaKnown RBP26■■□□□ 1.75
CPNE1-203ENST00000397442 TRBV5-3A0A0A0MS03 114 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 RNASET2O00584 256 aaKnown RBP25.99■■□□□ 1.75
CPNE1-203ENST00000397442 PGRMC2O15173 223 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 ANXA8L1Q5VT79 327 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 FAM180BQ6P0A1 224 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 BNC2Q6ZN30 1099 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-203ENST00000397442 B3GNT8Q7Z7M8 397 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 ULK2Q8IYT8 1036 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 VAPAQ9P0L0 249 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 PHF11Q9UIL8 331 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 CES1P1Q9UKY3 287 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 A0A096LPI6 279 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 A0A0A6YYC8 382 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-203ENST00000397442 C1orf226A1L170 272 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 GLOD5A6NK44 160 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 I3L1I5 382 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-203ENST00000397442 HNRNPFP52597 415 aaKnown RBP25.99■■□□□ 1.75
CPNE1-203ENST00000397442 PDX1P52945 283 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 TNFRSF17Q02223 184 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 DNAJC14Q6Y2X3 702 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-203ENST00000397442 CA13Q8N1Q1 262 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 DNAJB14Q8TBM8 379 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 RAB3IPQ96QF0 476 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-203ENST00000397442 CSF3RQ99062 836 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 CGREF1Q99674 301 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 NPLQ9BXD5 320 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-203ENST00000397442 TRIM8Q9BZR9 551 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 SPAG4Q9NPE6 437 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 SIDT1Q9NXL6 827 aaKnown RBP25.99■■□□□ 1.75
CPNE1-203ENST00000397442 TMEM181Q9P2C4 612 aa25.99■■□□□ 1.75
CPNE1-203ENST00000397442 NUP214P35658 2090 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-203ENST00000397442 EP300Q09472 2414 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-203ENST00000397442 RDH16O75452 317 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 ERN1O75460 977 aaKnown RBP25.98■■□□□ 1.75
CPNE1-203ENST00000397442 ITGA1P56199 1179 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 GTDC1Q4AE62 458 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 PHF19Q5T6S3 580 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 NANOGP8Q6NSW7 305 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 SLC48A1Q6P1K1 146 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 SLC15A3Q8IY34 581 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 DNAJB8Q8NHS0 232 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 NANOGQ9H9S0 305 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 SLAMF7Q9NQ25 335 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 ABCD2Q9UBJ2 740 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 PACSIN3Q9UKS6 424 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 PCDHB14Q9Y5E9 798 aa25.98■■□□□ 1.75
CPNE1-203ENST00000397442 RFXANKO14593 260 aa25.97■■□□□ 1.75
CPNE1-203ENST00000397442 NSA2O95478 260 aaKnown RBP25.97■■□□□ 1.75
CPNE1-203ENST00000397442 NR2F6P10588 404 aa25.97■■□□□ 1.75
CPNE1-203ENST00000397442 FRKP42685 505 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-203ENST00000397442 TRPC1P48995 793 aa25.97■■□□□ 1.75
CPNE1-203ENST00000397442 SLC7A2P52569 658 aa25.97■■□□□ 1.75
CPNE1-203ENST00000397442 PCBP4P57723 403 aaKnown RBP25.97■■□□□ 1.75
CPNE1-203ENST00000397442 PIGGQ5H8A4 983 aa25.97■■□□□ 1.75
CPNE1-203ENST00000397442 PRAMEF17Q5VTA0 474 aa25.97■■□□□ 1.75
CPNE1-203ENST00000397442 SCUBE1Q8IWY4 988 aa25.97■■□□□ 1.75
CPNE1-203ENST00000397442 TTC29Q8NA56 475 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-203ENST00000397442 VPS37AQ8NEZ2 397 aa25.97■■□□□ 1.75
CPNE1-203ENST00000397442 EXOSC8Q96B26 276 aaKnown RBP25.97■■□□□ 1.75
CPNE1-203ENST00000397442 CUTCQ9NTM9 273 aa25.97■■□□□ 1.75
CPNE1-203ENST00000397442 MS4A12Q9NXJ0 267 aa25.97■■□□□ 1.75
CPNE1-203ENST00000397442 SERTAD3Q9UJW9 196 aa25.97■■□□□ 1.75
CPNE1-203ENST00000397442 SORBS2O94875 1100 aaKnown RBP25.96■■□□□ 1.75
CPNE1-203ENST00000397442 GSNP06396 782 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 CPN2P22792 545 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 ACY1Q03154 408 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 TRA2AQ13595 282 aaKnown RBP eCLIP25.96■■□□□ 1.75
CPNE1-203ENST00000397442 CEACAM7Q14002 265 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 RABL3Q5HYI8 236 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 PRMT9Q6P2P2 845 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 TLDC1Q6P9B6 456 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 ARHGAP24Q8N264 748 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 TMEM125Q96AQ2 219 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 PANX1Q96RD7 426 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 CMTM6Q9NX76 183 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 UTS2RQ9UKP6 389 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 CYR61O00622 381 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 NME4O00746 187 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 PDE5AO76074 875 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 BUD31P41223 144 aaPredicted RBP25.96■■□□□ 1.75
CPNE1-203ENST00000397442 LRRC74AQ0VAA2 488 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 FAM214AQ32MH5 1076 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 NIPAL1Q6NVV3 410 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms