RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 BMP2P12643 396 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 DDCP20711 480 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 ACP1P24666 158 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 TSFMP43897 325 aaKnown RBP18.32■□□□□ 0.52
LMNB1-202ENST00000395354 PPM1FP49593 454 aaPredicted RBP18.32■□□□□ 0.52
LMNB1-202ENST00000395354 RPS15AP62244 130 aaKnown RBP18.32■□□□□ 0.52
LMNB1-202ENST00000395354 RELAQ04206 551 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 HEPACAMQ14CZ8 416 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 GRAMD1BQ3KR37 738 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 ZNF385BQ569K4 471 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 OR4C11Q6IEV9 310 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 ERICH5Q6P6B1 374 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 KLHL35Q6PF15 583 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 UBE3DQ7Z6J8 389 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 ANKFN1Q8N957 763 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 SRFBP1Q8NEF9 429 aaKnown RBP18.32■□□□□ 0.52
LMNB1-202ENST00000395354 OR10G6Q8NH81 332 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 FLVCR1-AS1Q8TAF5 88 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 TM4SF18Q96CE8 201 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 AURKBQ96GD4 344 aaPredicted RBP18.32■□□□□ 0.52
LMNB1-202ENST00000395354 CCDC3Q9BQI4 270 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 VCXQ9H320 206 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 LHX9Q9NQ69 397 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 MIEF1Q9NQG6 463 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 HRASLS2Q9NWW9 162 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 PCDHGB4Q9UN71 923 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 AURKCQ9UQB9 309 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 PCDHGA4Q9Y5G9 962 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 KLK4Q9Y5K2 254 aa18.32■□□□□ 0.52
LMNB1-202ENST00000395354 IGHV1OR21-1A0A087WYE8 117 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 C1orf226A1L170 272 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 H0YJX3 145 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 CXCR6O00574 342 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 PROS1P07225 676 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 ABCB1P08183 1280 aaPredicted RBP18.31■□□□□ 0.52
LMNB1-202ENST00000395354 FASP25445 335 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 MC1RQ01726 317 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 LRRC36Q1X8D7 754 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 AMZ1Q400G9 498 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 NKAIN2Q5VXU1 208 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 SPRED1Q7Z699 444 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 PLD3Q8IV08 490 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 OR4A15Q8NGL6 344 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 PPWD1Q96BP3 646 aaKnown RBP18.31■□□□□ 0.52
LMNB1-202ENST00000395354 AHCYL2Q96HN2 611 aaKnown RBP18.31■□□□□ 0.52
LMNB1-202ENST00000395354 BTBD9Q96Q07 612 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 OR2A14Q96R47 310 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 SORBS1Q9BX66 1292 aaKnown RBP18.31■□□□□ 0.52
LMNB1-202ENST00000395354 ERVK-11Q9UQG0 969 aa18.31■□□□□ 0.52
LMNB1-202ENST00000395354 A0A0A6YYD5 115 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 TIPRLO75663 272 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 IL1RNP18510 177 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 POLR2CP19387 275 aaPredicted RBP18.3■□□□□ 0.52
LMNB1-202ENST00000395354 GPLD1P80108 840 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 TRIP6Q15654 476 aaKnown RBP18.3■□□□□ 0.52
LMNB1-202ENST00000395354 SFT2D3Q587I9 215 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 CPZQ66K79 652 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 TRIML2Q8N7C3 387 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 FAM47BQ8NA70 645 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 ICA1LQ8NDH6 482 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 DEFB124Q8NES8 71 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 FIG4Q92562 907 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 RSC1A1Q92681 617 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 THAP11Q96EK4 314 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 TBCDQ9BTW9 1192 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 UGT2B28Q9BY64 529 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 EPB41L1Q9H4G0 881 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 TPT1P8Q9HAU6 139 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 AGPAT4Q9NRZ5 378 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 OLAHQ9NV23 265 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 ACTR10Q9NZ32 417 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 PIEZO1Q92508 2521 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 OR2A25A4D2G3 310 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 OR5K3A6NET4 321 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 RTCAO00442 366 aaKnown RBP18.3■□□□□ 0.52
LMNB1-202ENST00000395354 TM4SF5O14894 197 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 GP1BAP07359 652 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 DRD2P14416 443 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 CD1CP29017 333 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 STXBP1P61764 594 aaKnown RBP18.3■□□□□ 0.52
LMNB1-202ENST00000395354 HYAL2Q12891 473 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 SLC5A12Q1EHB4 618 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 HMBOX1Q6NT76 420 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 ARMC6Q6NXE6 501 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 USP53Q70EK8 1073 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 OOSP2Q86WS3 158 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 FAM20CQ8IXL6 584 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 OR2L5Q8NG80 312 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 ZFP90Q8TF47 636 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 MS4A6EQ96DS6 147 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 KCNC2Q96PR1 638 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 YY1AP1Q9H869 796 aa18.3■□□□□ 0.52
LMNB1-202ENST00000395354 CNOT1A5YKK6 2376 aaKnown RBP18.29■□□□□ 0.52
LMNB1-202ENST00000395354 C2orf74A8MZ97 194 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 CASC3O15234 703 aaKnown RBP18.29■□□□□ 0.52
LMNB1-202ENST00000395354 GUCY1B2O75343 617 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 CREG1O75629 220 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 SERPIND1P05546 499 aa18.29■□□□□ 0.52
LMNB1-202ENST00000395354 RPSAP08865 295 aaKnown RBP18.29■□□□□ 0.52
LMNB1-202ENST00000395354 UGT2B7P16662 529 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms