RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 A0A1W2PR48 441 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 B4DGG1 531 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 GCM2O75603 506 aaPredicted RBP14.18□□□□□ -0.14
CCT4-201ENST00000394440 SLC35G6P0C7Q6 338 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 FASLGP48023 281 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 CXCL12P48061 93 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 NXPH1P58417 271 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 RGS1Q08116 209 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 RBBP4Q09028 425 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 C6orf52Q5T4I8 152 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 SAXO2Q658L1 398 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 SLC36A4Q6YBV0 504 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 RNF44Q7L0R7 432 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 ZNF761Q86XN6 746 aaPredicted RBP14.18□□□□□ -0.14
CCT4-201ENST00000394440 C11orf65Q8NCR3 313 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 UTP15Q8TED0 518 aaKnown RBP14.18□□□□□ -0.14
CCT4-201ENST00000394440 RSC1A1Q92681 617 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 MAL2Q969L2 176 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 ZBED6CLQ96FA7 236 aaPredicted RBP14.18□□□□□ -0.14
CCT4-201ENST00000394440 ZFYVE21Q9BQ24 234 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 OSBPL11Q9BXB4 747 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 TMEM121BQ9BXQ6 578 aaPredicted RBP14.18□□□□□ -0.14
CCT4-201ENST00000394440 RAD21L1Q9H4I0 556 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 Q9H521 79 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 FAF1Q9UNN5 650 aaPredicted RBP14.18□□□□□ -0.14
CCT4-201ENST00000394440 SNX11Q9Y5W9 270 aa14.18□□□□□ -0.14
CCT4-201ENST00000394440 A0A0J9YVX5 310 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 TXNDC9O14530 226 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 VILLO15195 856 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 PRKRAO75569 313 aaKnown RBP14.17□□□□□ -0.14
CCT4-201ENST00000394440 KRT75O95678 551 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 AIFM1O95831 613 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 DCNP07585 359 aaKnown RBP14.17□□□□□ -0.14
CCT4-201ENST00000394440 PVRP15151 417 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 SOAT1P35610 550 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 CRATP43155 626 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 MANFP55145 182 aaKnown RBP14.17□□□□□ -0.14
CCT4-201ENST00000394440 PPP1CAP62136 330 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 MRPS35P82673 323 aaKnown RBP14.17□□□□□ -0.14
CCT4-201ENST00000394440 EEF1A2Q05639 463 aaKnown RBP14.17□□□□□ -0.14
CCT4-201ENST00000394440 TGM3Q08188 693 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 TEAD4Q15561 434 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 NHSL2Q5HYW2 709 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 FKBP9P1Q75LS8 142 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 EIF3MQ7L2H7 374 aaKnown RBP14.17□□□□□ -0.14
CCT4-201ENST00000394440 OOSP2Q86WS3 158 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 RNF130Q86XS8 419 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 CHERPQ8IWX8 916 aaKnown RBP14.17□□□□□ -0.14
CCT4-201ENST00000394440 DNASE2BQ8WZ79 361 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 NEURL3Q96EH8 262 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 DNAJB9Q9UBS3 223 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 POMT2Q9UKY4 750 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 SIT1Q9Y3P8 196 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 CACNA1IQ9P0X4 2223 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 RNF103-CHMP3A0A140T963 221 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 MAGEA13PA6NCF6 341 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 STK25O00506 426 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 GUCY1B2O75343 617 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 LYNP07948 512 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 MAZP56270 477 aaKnown RBP14.17□□□□□ -0.14
CCT4-201ENST00000394440 PDK3Q15120 406 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 GCNT6Q5T4J0 391 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 ANGPTL8Q6UXH0 198 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 DGLUCYQ7Z3D6 616 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 GALNT10Q86SR1 603 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 C17orf82Q86X59 251 aaPredicted RBP14.17□□□□□ -0.14
CCT4-201ENST00000394440 TMBIM1Q969X1 311 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 VPS50Q96JG6 964 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 NLNQ9BYT8 704 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 MIR1-1HGQ9H1L0 117 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 SLC35C2Q9NQQ7 365 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 LYARQ9NX58 379 aaKnown RBP14.17□□□□□ -0.14
CCT4-201ENST00000394440 RPS6KA6Q9UK32 745 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 CES1P1Q9UKY3 287 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 BDP1A6H8Y1 2624 aa14.17□□□□□ -0.14
CCT4-201ENST00000394440 TMEM229AB2RXF0 380 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 EI24O14681 340 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 PRAMEF10O60809 474 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 B4GALT2O60909 372 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 ZNF888P0CJ79 500 aaPredicted RBP14.16□□□□□ -0.14
CCT4-201ENST00000394440 CHI3L1P36222 383 aaPredicted RBP14.16□□□□□ -0.14
CCT4-201ENST00000394440 CDK9P50750 372 aaKnown RBP14.16□□□□□ -0.14
CCT4-201ENST00000394440 SIM2Q14190 667 aaPredicted RBP14.16□□□□□ -0.14
CCT4-201ENST00000394440 FRMPD2BQ6IN97 320 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 UGT2A3Q6UWM9 527 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 GKN2Q86XP6 184 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 OR10Q1Q8NGQ4 319 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 N4BP2L2Q92802 583 aaPredicted RBP14.16□□□□□ -0.14
CCT4-201ENST00000394440 IER2Q9BTL4 223 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 KLHL25Q9H0H3 589 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 GLIPR2Q9H4G4 154 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 UCK1Q9HA47 277 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 BATF3Q9NR55 127 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 UBAP1Q9NZ09 502 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 LOC105369274A0A096LPK9 316 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 LOC102723532A0A0G2JNH3 316 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 EIF4E1BA6NMX2 242 aaKnown RBP14.16□□□□□ -0.14
CCT4-201ENST00000394440 WASHC1A8K0Z3 465 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 PROM1O43490 865 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 SH3BP5O60239 455 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms