RNA–Protein interactions for RNA: ENST00000394243.5

SYNPO-202, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 7,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-202ENST00000394243 ENPP6Q6UWR7 440 aa11.42□□□□□ -0.58
SYNPO-202ENST00000394243 THOC6Q86W42 341 aaKnown RBP11.42□□□□□ -0.58
SYNPO-202ENST00000394243 DOHHQ9BU89 302 aa11.42□□□□□ -0.58
SYNPO-202ENST00000394243 MST1RQ04912 1400 aa11.42□□□□□ -0.58
SYNPO-202ENST00000394243 CDK1P06493 297 aa11.42□□□□□ -0.58
SYNPO-202ENST00000394243 SSTR4P31391 388 aa11.42□□□□□ -0.58
SYNPO-202ENST00000394243 CLCNKBP51801 687 aa11.42□□□□□ -0.58
SYNPO-202ENST00000394243 SLC25A11Q02978 314 aaKnown RBP11.42□□□□□ -0.58
SYNPO-202ENST00000394243 KCNC4Q03721 635 aa11.42□□□□□ -0.58
SYNPO-202ENST00000394243 RAB8BQ92930 207 aa11.42□□□□□ -0.58
SYNPO-202ENST00000394243 KIAA1191Q96A73 305 aa11.42□□□□□ -0.58
SYNPO-202ENST00000394243 ADARB2Q9NS39 739 aaKnown RBP11.42□□□□□ -0.58
SYNPO-202ENST00000394243 GRHPRQ9UBQ7 328 aa11.42□□□□□ -0.58
SYNPO-202ENST00000394243 ADM5C9JUS6 153 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 C6orf136Q5SQH8 315 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 RELL1Q8IUW5 271 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ZNF527Q8NB42 609 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 OR4K1Q8NGD4 311 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 TSPEARQ8WU66 669 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 EFCAB11Q9BUY7 163 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ANKRD60Q9BZ19 345 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 TMEM39AQ9NV64 488 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ZNF701Q9NV72 531 aaPredicted RBP11.41□□□□□ -0.58
SYNPO-202ENST00000394243 SOBPA7XYQ1 873 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 SULT1C2O00338 296 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ADH1CP00326 375 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 CBLP22681 906 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ARL2P36404 184 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 CDKN1CP49918 316 aaPredicted RBP11.41□□□□□ -0.58
SYNPO-202ENST00000394243 RPS13P62277 151 aaKnown RBP11.41□□□□□ -0.58
SYNPO-202ENST00000394243 DGKZQ13574 1117 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 SOWAHAQ2M3V2 549 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 PSRC1Q6PGN9 363 aaPredicted RBP11.41□□□□□ -0.58
SYNPO-202ENST00000394243 KRTCAP2Q8N6L1 136 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 NLGN2Q8NFZ4 835 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ORAI3Q9BRQ5 295 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 MEAF6Q9HAF1 191 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ENY2Q9NPA8 101 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ENPP5Q9UJA9 477 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 MYBPHLA2RUH7 354 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 TLL1O43897 1013 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 STATHP02808 62 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 PROZP22891 400 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 CD6P30203 668 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 FRKP42685 505 aaPredicted RBP11.41□□□□□ -0.58
SYNPO-202ENST00000394243 CARD16Q5EG05 197 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 PRSS58Q8IYP2 241 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 PIP5K1AQ99755 562 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 BCL7BQ9BQE9 202 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ZNF701M0R085 212 aaPredicted RBP11.41□□□□□ -0.58
SYNPO-202ENST00000394243 GMDSO60547 372 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 TRBV2A0A0J9YWF9 115 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 F5H5P2 479 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 EBLN1P0CF75 366 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 SSTR2P30874 369 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 IRF5Q13568 498 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 TMEM205Q6UW68 189 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 OR6N2Q8NGY6 317 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 SIGLEC10Q96LC7 697 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 HAPLN3Q96S86 360 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ZNF223Q9UK11 482 aaPredicted RBP11.41□□□□□ -0.58
SYNPO-202ENST00000394243 HSPE1-MOB4S4R3N1 261 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 OR4D2P58180 307 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 PPIGQ13427 754 aaKnown RBP eCLIP11.41□□□□□ -0.58
SYNPO-202ENST00000394243 SYPL2Q5VXT5 272 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ZNF516Q92618 1163 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 FRZBQ92765 325 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 KLHL15Q96M94 604 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 TBL1XR1Q9BZK7 514 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 KCNH6Q9H252 994 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 ZDHHC3Q9NYG2 299 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 SARDHQ9UL12 918 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 PTGDR2Q9Y5Y4 395 aa11.41□□□□□ -0.58
SYNPO-202ENST00000394243 NPIPA5E9PKD4 350 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 SLC16A8O95907 504 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 ATP5A1P25705 553 aaKnown RBP11.4□□□□□ -0.58
SYNPO-202ENST00000394243 RAB5CP51148 216 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 LASP1Q14847 261 aaKnown RBP11.4□□□□□ -0.58
SYNPO-202ENST00000394243 PRAMEF14Q5SWL7 426 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 ZNF550Q7Z398 422 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 CILP2Q8IUL8 1156 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 METTL4Q8N3J2 472 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 MINDY1Q8N5J2 469 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 THRSPQ92748 146 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 SRMSQ9H3Y6 488 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 NPIPA1Q9UND3 350 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 ERI3O43414 337 aaKnown RBP11.4□□□□□ -0.58
SYNPO-202ENST00000394243 ALPIP09923 528 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 CCKBRP32239 447 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 NFATC4Q14934 902 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 DACT2Q5SW24 774 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 CNIH2Q6PI25 160 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 CDHR3Q6ZTQ4 885 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 RBM23Q86U06 439 aaKnown RBP11.4□□□□□ -0.58
SYNPO-202ENST00000394243 DCP2Q8IU60 420 aaKnown RBP11.4□□□□□ -0.58
SYNPO-202ENST00000394243 TTLQ8NG68 377 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 LRR1Q96L50 414 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 OR2AG1Q9H205 316 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 GFOD1Q9NXC2 390 aa11.4□□□□□ -0.58
SYNPO-202ENST00000394243 COQ4Q9Y3A0 265 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms